Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4312 ATGGTGAGCCAGGAAGATTTGTTGATTGGAAAGATCTGCGACCTCTACGACGAGATCTCCAGCCTCAATAGTCTCAAACCCTGCGAGAATGTCGACACCCTTTTTACCCAACTCGTCCTCACATGCATACCACCCAGCCCTATTGATGTCACCAAGCTCCCCAAAAGCCTTCAAGAGATTCGATCCAAACTCATTCGACTCTGTGGCCAGGCCGAAGGCCTTCTCGAGAGCCACTACTCCACCATCCTCGGCTCCTTCGACAACCCTCTCCGCCACCTCCACATCTTCCCTTACTACTCCAACTACCTCAAGCTCGGCCTCCTTGAGTTCACCATCCTCACCCAGCACTGCACTCGCGTCCCTTCCACCATAGCCTTCGTCGGCTCGGGTCCTCTCCCTTTCACTTCCATCGTCCTGGCCTCCAATCACCTCCCCACCACCACCTTCCACAACTATGACATCGACCCACAGGCCAATTCCATGGCCCTCCGCTTGTTTTCTTCTGATAATGATTTGTCCAAGCGCATGGTCTTTCACACCAGCGATATCTTGGACGTGACCAAGGACTTGGAAGAGTATGATATTGTTTATTTGGCGGCTCTCGTGGGGATGGACAAGGCGGAGAAGAATCGGATCATCGATCATCTGGCCGAGTACATGGCTCCGGGAGCGCTTCTGATGCTGAGGAGCGCCCATGGGGCTCGTGCTTTCCTGTACCCTGTGGTTGAGCCCGGCGATCTTCGAGGCTTCGAGGTGCTCTCCGTGTTTCATCCGACGGATGAGGTTATCAATTCCGTGGTCATAGCACGGAAGTATCCCCTGCCTCTACACGGCTCGCATGATCAGCAAAGTCTTCCGAACATGATATTACCCAACAAGTGTTCTGAAATACAGGTCTTTAATCCCCTCATCAACCATGGCAATATGATTGAGGAGTTGACCGTTGAGGAACAGCTATCGTGA 963 0.5286 MVSQEDLLIGKICDLYDEISSLNSLKPCENVDTLFTQLVLTCIPPSPIDVTKLPKSLQEIRSKLIRLCGQAEGLLESHYSTILGSFDNPLRHLHIFPYYSNYLKLGLLEFTILTQHCTRVPSTIAFVGSGPLPFTSIVLASNHLPTTTFHNYDIDPQANSMALRLFSSDNDLSKRMVFHTSDILDVTKDLEEYDIVYLAALVGMDKAEKNRIIDHLAEYMAPGALLMLRSAHGARAFLYPVVEPGDLRGFEVLSVFHPTDEVINSVVIARKYPLPLHGSHDQQSLPNMILPNKCSEIQVFNPLINHGNMIEELTVEEQLS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4312 320 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Prci1g4312 320 PANTHER NICOTIANAMINE SYNTHASE 3 4 313 IPR004298 GO:0030410|GO:0030418
Prci1g4312 320 Pfam Nicotianamine synthase protein 4 272 IPR004298 GO:0030410|GO:0030418
Prci1g4312 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 234 IPR029063 -
Prci1g4312 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4312 Prci-Chr1 57466590 57468116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4312 4 320 Nicotianamine Synthase Gene Family AT1G56430 60.991 6.87e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4312 K05953 - gmx:100794250 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4312 1 57466590 57468116 Prci1g4312 1 57466590 57468116 ECH