Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4298 ATGTCTGACAACAAGGATTGCACAGACCAATACGGCGTCCTCCTCTACTATAAGTATGCTCAATTTCCTAACCTTGACCACCTCCTCACTTTCTACGAGTCTAACTGCTCCTCCCTTGGCCTCCTTGGTCGCGTTCGTATCTCCTCCCACGGCGTCAATGTCACTGTTGGTGGTAAGTTAGCCTCTCTAGAAAGACACGTTGAAACAGTCAATGGTAATAGTTTATTTGAAGGAACTGATTTCAAGCTTGCTGCTTGTCATCAACCATTGAACGACAAGATTGCAAAAGAATGCGGCTTTACCTCTCTCTCAGTTCGAATTGTCAAGGAACTGGTTACTCTTAGTTCCCATCCCTTGCTAAAACAACCAGAAATTTCAAACGCTGGAAGACATCTCTCTGCAGCTGAGTTTCATTCTGTCCTACAGAATGCTGCCAAGGACAGTCCAGCAGACAACCTTGTCTTACTTGACGCAAGGAATCTTTATGAGACAAGAATTGGGAAATTTCATGCCCCAAATGTTGAAACTTTGGATCCACAAGTAAGACAATACAGCGATTTGCCATCATGGATAGATGGTAATCATGATCAATTGAAAGGGAAGCAAATCCTCATGTACTGCACTGGCGGAATCAGATGTGAAATGGCATCAGCATATATTAGATCAAAAGGTCTGGGCTTTGAGAATGTGTTTCAGCTATCTGGTGGGATACAACGATACATGGAGCAATATCCTGATGGTGGTTTCTTTAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCTGTTGGGAGCTCAGATGCAAACGTTATTGGTACCTGCCTTACTTGTGGAAGCTCATTTGATGATTATTCTTCACGGTGCCGATGTGCTTGTTGCAGAATGCTTGTTTTGGTCTGCAATAGTTGTCAGGATGAAGCTGCACCCTATGTTTGTGAGTTATGCCAAAAACAGGGTAAGGCTGTTAGGATGTTGCAGCTAACCGAAACTGGTGAAGCAGAAAAGTCACTTCCAGATGTTGAGTTTCAAACGGTTCCCTTAGACACTACTTTCTCATCCCAAATGCCTCAGAAAAAGGGTAAGATGTCAGGTCAGCAAGAAAACTCAGGATCTTATGCTTACATGGATTTCGGCAGAACGCATCAAGTTTTAAAGGAAGAACAGCATCATTGGCCAAAAAACTTAAGAAAATTGCTGACTTATTTTTTATAG 1212 0.4233 MSDNKDCTDQYGVLLYYKYAQFPNLDHLLTFYESNCSSLGLLGRVRISSHGVNVTVGGKLASLERHVETVNGNSLFEGTDFKLAACHQPLNDKIAKECGFTSLSVRIVKELVTLSSHPLLKQPEISNAGRHLSAAEFHSVLQNAAKDSPADNLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDLPSWIDGNHDQLKGKQILMYCTGGIRCEMASAYIRSKGLGFENVFQLSGGIQRYMEQYPDGGFFKGKNFVFDHRISVGSSDANVIGTCLTCGSSFDDYSSRCRCACCRMLVLVCNSCQDEAAPYVCELCQKQGKAVRMLQLTETGEAEKSLPDVEFQTVPLDTTFSSQMPQKKGKMSGQQENSGSYAYMDFGRTHQVLKEEQHHWPKNLRKLLTYFL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4298 403 SMART rhod_4 139 246 IPR001763 -
Prci1g4298 403 Gene3D - 121 276 IPR036873 -
Prci1g4298 403 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Prci1g4298 403 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 109 263 IPR036873 -
Prci1g4298 403 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 5 373 IPR020936 -
Prci1g4298 403 Gene3D - 1 112 - -
Prci1g4298 403 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Prci1g4298 403 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Prci1g4298 403 Pfam UPF0176 acylphosphatase like domain 12 110 IPR040503 -
Prci1g4298 403 CDD RHOD_YceA 129 242 - -
Prci1g4298 403 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4298 Prci-Chr1 57357532 57361561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4298 9 339 Sulfurtransferasese or Rhodanese AT1G09280 69.789 2.44e-172 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4298 - - aip:107618651 581.637