Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4292 ATGATTTCTGATGGCAATTCAGGGCCTACGATCGAGATCAATGATCTGAAATTCACATATCCTGGGATCGATGGCCATCCTCCTCCGGGTTCCCCTCCTCTCATCCAAGATTTCTCTCTCACCCTCAATCCGGACCGCTGCCTTCTAGTCGGGTCTAATGGCGCTGGCAAGACCACCATACTTAAGATCTTGGGAGGGAAGCACATGGTGCAACCAGGCATGGTTCGTGTACTTGGAAGATCAGCTTTTCACGACACCACTTTAGTATCTTCTGGTGATCTGTGTTATCTTGGTGGAGAGTGGAGACGAGATGTTGCTTTTGCAGGGTTTGAGGTTCCAATACAAATGGATGTTTCTGCAGAGAAACTGATATTTGGGGTAGGTGGAATTGATCCTGGAAGAAGAGCAGAGCTAATCAAGGTACTAGATATCAATCTCTCCTGGAGGATGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTTCAAATTTGTATGGGTCTTCTCAAGCCATTCAAGGTTCTTCTTCTTGATGAGATTACAGTGGATCTTGATGTTCTAGCAAGGGCTGATCTTCTGAACTTTCTGCGGAAGGAATGTGAAGAGAGGGGTGCTACAATTATGTATGCAACGCATATATTTGACGGTCTTGAGAATTGGCCTACACACATAGTTTATGTAGCTCATGGGAAGCTGCAACTAGCAATGCCTATGGATAAAGTCAAAGACATTAGCAAATTGTCACTGATGAGAACAGTTGAAAGTTGGCTGAGGAAAGAACGAGGTGAAGAGAGGAAGAGAAGGAAAGAGAGGAAGGCAAAAGGTCTTCCGGAATTTGAAAGGCAAGTTGAGGGAAGCCGAGTGGCAGGGGATCCAGCTCGACTCATGAATAATGGCTGGGCAGCAGGGCGACTGAATCCAACCGTTGCTGGCGAGGAGAACTTTCTCCTCAGCTCAAACAGAGTGCTGAGGCAATAG 975 0.4615 MISDGNSGPTIEINDLKFTYPGIDGHPPPGSPPLIQDFSLTLNPAXRCLLVGSNGAGKTTILKILGGKHMVQPGMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKLIFGVGGIDPGRRAELIKVLDINLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLNFLRKECEERGATIMYATHIFDGLENWPTHIVYVAHGKLQLAMPMDKVKDISKLSLMRTVESWLRKERGEERKRRKERKAKGLPEFERQVEGSRVAGDPARLMNNGWAAGRLNPTVAGEENFLLSSNRVLRQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4292 325 Pfam ABC transporter 36 181 IPR003439 GO:0005524
Prci1g4292 325 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 10 257 - -
Prci1g4292 325 SMART AAA_5 44 231 IPR003593 GO:0016887
Prci1g4292 325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 254 IPR003439 GO:0005524
Prci1g4292 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 246 IPR027417 -
Prci1g4292 325 Gene3D - 7 287 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4292 Prci-Chr1 57310232 57315127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4292 11 227 Calmodulin-binding Proteins AT2G36910 22.222 3.82e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4292 K12608 - zju:107407504 556.214