Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4289 ATGGCAAGTGGATTCATTCCTTTTCTGGCAATGGCTTTTGTGCAGCTGGGATATTCGGGCATGAATATCAGTTCAAAGCTTGCAATGCAATCTGGCATGAACCCTATTGTCCTTGCTGCTTATCGCCAAATCTTCGCCACACTTGCCATCGCTCCCTTTGCTTATTGCTTCGAACGCAAAAAGGTCCCCAAGTTGACCAGACCCATTATGTTCCAGATATTGCTTTCTTCCTTAACTGGAGTAACAGGAAACCAAGTATTTTTCTTCCTGGGGCTGAAATATTCAACCACTACAATAGCATGCGCAATGACAAATATGCTCCCGGCTTTCACCTTCATCCTTGCGCTTGTTTTCAGGCAAGAGTACCTGAGAATAAGGGCATGGAGTGGGCAAGCGAAGATAGCAGGGACTGTATTGTGTGTGGGTGGAGCCTTGGTATTGTCATTCTACCACGGAAATGCCATTGACATCGGTGAATCGAATATTCACTGGGAATATGCAGAGAGAATGGGAGCAACAAACTCCTTTGTCAGTGACAACACGTTTCTTGGCCCTTTCTTCTTAATTGCTAGTGCTCTCGTCTGGGCAGTGTGGTTCATCGTCCAAGCGGACCTGGGAAAAATTTTCGCAGCTCCGTATACGAGCACGACCTACATGTGCTTCTTGGCAAGCTTCCAGTGCGTGGTCATTGCTTTGTGCTTTGATCACAGCACCTCAGCTTGGTCTCTCGCCAATCCCATCCGAGTCATTTCTGCTCTTTATTCGGGAGTTATTTGCACTGGAGTAGCGTATGGGCTCATGTCGTGGACTATTGAGAGGAAAGGTCCTCTTTATGTGTCCGTGTTCACCCCCTTGCAGCTCGTCATCACTGCTTTTATCAGCTGGGCTCTGCTTCGCGAGGAAATATACGTCGGAACTGTTATAGGGTCGCTGCTCATAGTCTTGGGACTCTACTCTGTTTTGTGGGGGAAGAACACGGAGATCGCCAAGAAAGAGGAGAACGAAGATATAGAAGCAGCGGTGGAGAAGAAGGGGAAAGAGGCGAAGAATAACGACTCGGAATTGCATTCCTTAGTGGTGTCTTCAAACGGGAATAATGAGTTCGCTGCGAGTTAG 1116 0.4758 MASGFIPFLAMAFVQLGYSGMNISSKLAMQSGMNPIVLAAYRQIFATLAIAPFAYCFERKKVPKLTRPIMFQILLSSLTGVTGNQVFFFLGLKYSTTTIACAMTNMLPAFTFILALVFRQEYLRIRAWSGQAKIAGTVLCVGGALVLSFYHGNAIDIGESNIHWEYAERMGATNSFVSDNTFLGPFFLIASALVWAVWFIVQADLGKIFAAPYTSTTYMCFLASFQCVVIALCFDHSTSAWSLANPIRVISALYSGVICTGVAYGLMSWTIERKGPLYVSVFTPLQLVITAFISWALLREEIYVGTVIGSLLIVLGLYSVLWGKNTEIAKKEENEDIEAAVEKKGKEAKNNDSELHSLVVSSNGNNEFAAS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4289 371 MobiDBLite consensus disorder prediction 354 371 - -
Prci1g4289 371 MobiDBLite consensus disorder prediction 342 371 - -
Prci1g4289 371 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Prci1g4289 371 Pfam EamA-like transporter family 18 148 IPR000620 GO:0016020
Prci1g4289 371 PANTHER WAT1-RELATED PROTEIN 7 332 IPR030184 GO:0016020|GO:0022857
Prci1g4289 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
Prci1g4289 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4289 Prci-Chr1 57303284 57305534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4289 3 367 Nodulin-like Gene Family AT1G09380 55.191 5.53e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4289 - - gmx:100811613 473.011