Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4277 ATGGGCGCTGATCTTAATGCTGAATTATCCAAGAAAACATCACTTTTTGGACTTAAAGCTTGGGAAATAACTGGAATTGCTGTTGGATTGTTTATAGTAGTTATACTCGTGCTCTCTGTTTGCCTTACTTCGCGGAAGAAATCAAGAAAAGCCAAGGATAGGATTCCCCTTAGTCAAATACCAACTGTCTCGAAGGATATTAAGGAAGTGAGGGTTAAGCACGTACCAGCAAATGGATTTGCTCCTCGTGATGGAATTCTTCTCACAATACATGATAAATCCAGTGACAGAGAATCAGACAAAGTTATGGTCCATTTGGGCGTGGGGAAGATGAAAAATGGGGATAATAGCAGTTTTTCCGATTCATTCAATCACTTGGAGATAGATGGAGGTGGATCACAGTCAGTAGAGGAAGGTAGCTCTGGCACTCTTACAGTGTATAAGCACTCTTCTTCATACCCTATAACAGCTCCTTCCCCTCTGTCTGGTCTCCCAGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGATCTTGAAATTGCTACGAATCGTTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTATATCGGGGACAGCTGATCAATGGGAGTCCAGTGGCAATTAAAAAGATACTCAATAACATCGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGACATAAGAATTTGGTTCGCCTTTTGGGCTACTGCATTGAGGGGACGCACAGGATGCTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGAAGCACGAATGAAGATCCTCCTTGGCACGGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTGGTGCACCGGGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGCCATGTCACAACACGAGTTATGGGAACATTTGGATATGTGGCACCTGAATATGCAAATACTGGTCTTCTAAATGAAAAGAGTGATGTTTATAGCTTCGGTGTTATGCTCTTGGAAGCAATCACAGGAAGAGATCCAGTTGACTATGGTCGACCAACTCATGAAGTTAATCTGGTTGATTGGCTCAAGATGATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCCATATATTGAGGTGAGGCCCTCCACCAGAGCTTTAAAACGGGCCCTCTTGACTGCCCTGAGATGTGTGGATCCTGATTCCGAGAAGAGACCCAAGATGGGCCAAGTTGTACGGATGCTGGAGTCCCATGAGTACCCCTTGGCTAGAGAGGACCGAAGGCGCCGAAGAAATCAAGGGGAGAGCATGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATGGATCAGAGAGCAGAGGATAA 1500 0.446 MGADLNAELSKKTSLFGLKAWEITGIAVGLFIVVILVLSVCLTSRKKSRKAKDRIPLSQIPTVSKDIKEVRVKHVPANGFAPRDGILLTIHDKSSDRESDKVMVHLGVGKMKNGDNSSFSDSFNHLEIDGGGSQSVEEGSSGTLTVYKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAIKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVMLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSRRSEEVVDPYIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLAREDRRRRRNQGESMEIESQKEYSDTDGSESRG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4277 499 CDD STKc_IRAK 194 460 - -
Prci1g4277 499 PANTHER OS01G0323000 PROTEIN 5 488 - -
Prci1g4277 499 SMART serkin_6 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4277 499 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Prci1g4277 499 FunFam Putative receptor-like protein kinase 170 263 - -
Prci1g4277 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Prci1g4277 499 FunFam Putative receptor-like serine/threonine-protein kinase 264 475 - -
Prci1g4277 499 ProSiteProfiles Protein kinase domain profile. 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4277 499 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Prci1g4277 499 Pfam Protein kinase domain 189 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4277 499 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Prci1g4277 499 MobiDBLite consensus disorder prediction 446 499 - -
Prci1g4277 499 SUPERFAMILY Protein kinase-like (PK-like) 172 467 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4277 Prci-Chr1 57217965 57222023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4277 17 461 Trihelix Transcription Factor Family AT1G70460 39.778 5.27e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci1g4277 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4277 - - qsa:O6P43_007383 863.218