Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4274 ATGGGCGCTGATCTTAATGCTGAATTATCCAAGAAAACATCACTTTTTGGACTTAAAGCTTGGGAAATAACTGGAATTGCTGTTGGATTGTTTATAGTAGTTATACTCGTGCTCTCTGTTTGCCTTACTTCGCGGAAGAAATCAAGAAAAGCCAAGGATAGGATTCCCCTTAGTCAAATACCAACTGTCTCGAAGGATATTAAGGAAGTGAGGGTTAAGCACGTACCAGCAAATGGATTTGCTCCTCGTGATGGAATTCTTCTCACAATACATGATAAATCCAGTGACAGAGAATCAGACAAAGTTATGGTCCATTTGGGCGTGGGGAAGATGAAAAATGGGGATAATAGCAGTTTTTCCGATTCATTCAATCACTTGGAGATAGATGGAGGTGGATCACAGTCAGTAGAGGAAGGTAGCTCTGGCACTCTTACAGTGTATAAGCACTCTTCTTCATACCCTATAACAGCTCCTTCCCCTCTGTCTGGTCTCCCAGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGATCTTGAAATTGCTACGAATCGTTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTATATCGGGGACAGCTGATCAATGGGAGTCCAGTGGCAATTAAAAAGATACTCAATAACATCAGCGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGACATAAGAATTTGGTTCGCCTTTTGGGCTACTGCATTGAGGGGACGCACAGGATGCTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGAAGCACGAATGAAGATCCTCCTTGGCACGGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTGGTGCACCGGGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGCCATGTCACAACACGAGTTATGGGAACATTTGGATATGTGGCACCTGAATATGCAAATACTGGTCTTCTAAATGAAAAGAGTGATGTTTATAGCTTCGGTGTTATGCTCTTGGAAGCAATCACAGGAAGAGATCCAGTTGACTATGGTCGACCAACTCATGAAGTTAATCTGGTTGATTGGCTCAAGATGATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCCATATATTGAGGTGAGGCCCTCCACCAGAGCTTTAAAACGGGCCCTCTTGACTGCCCTGAGATGTGTGGATCCTGATTCCGAGAAGAGACCCAAGATGGGCCAAGTTGTACGGATGCTGGAGTCCCATGAGTACCCCTTGGCTAGAGAGGACCGAAGGCGCCGAAGAAATCAAGGGGAGAGCATGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATGGATCAGAGAGCAGAGGATAA 1503 0.4464 MGADLNAELSKKTSLFGLKAWEITGIAVGLFIVVILVLSVCLTSRKKSRKAKDRIPLSQIPTVSKDIKEVRVKHVPANGFAPRDGILLTIHDKSSDRESDKVMVHLGVGKMKNGDNSSFSDSFNHLEIDGGGSQSVEEGSSGTLTVYKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAIKKILNNISGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVMLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSRRSEEVVDPYIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLAREDRRRRRNQGESMEIESQKEYSDTDGSESRG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4274 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Prci1g4274 500 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Prci1g4274 500 SUPERFAMILY Protein kinase-like (PK-like) 172 468 IPR011009 -
Prci1g4274 500 ProSiteProfiles Protein kinase domain profile. 188 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4274 500 PANTHER OS01G0323000 PROTEIN 5 489 - -
Prci1g4274 500 SMART serkin_6 188 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4274 500 Gene3D Transferase(Phosphotransferase) domain 1 265 477 - -
Prci1g4274 500 CDD STKc_IRAK 194 461 - -
Prci1g4274 500 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g4274 500 FunFam Putative receptor-like serine/threonine-protein kinase 265 476 - -
Prci1g4274 500 FunFam Putative receptor-like protein kinase 170 264 - -
Prci1g4274 500 MobiDBLite consensus disorder prediction 447 500 - -
Prci1g4274 500 Gene3D Phosphorylase Kinase; domain 1 170 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4274 Prci-Chr1 57217962 57222023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4274 17 462 Trihelix Transcription Factor Family AT1G70460 40.133 2.53e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci1g4274 Pkinase 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4274 - - qsa:O6P43_007383 858.596