Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4249 ATGGATTATCCATGGACCAGTGGTGGGCGGGAAACTGGTACCATTGATAGGAGCCAAATCAGAAAGGGGAAGGAATCCTTTATCGAGGATTGGGCAGAGGATTTTCGGTTGCCTATCAATCACAGGCCAACAGAAAATGTTGATCTGGACAATGTTGAACAGGCATCTTTGGACACGCAGTTAACATCGTCTAATATTGGATTTAAGCTACTTCAAAAGATGGGATGGAAAGGAAAGGGTTTGGGGAAGAACGAGCAAGGAATTATTGAGCCAATAAAATCTGGTATTAGAGATCCCAGATTGGGTGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACGTCCAGCGAAAGAAACTTGATATCGAGCTGGAGGAGACAGAAGAAAATATGAGGAAGCGAGAGGTTTTGGCAGAACGTGAGCAAAAAATTCAAACTGAAGTCAAAGAAATTCGGAAGGTGTTTTTTTGTGATCTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCTCACTTGAGCTCATACGATCACAATCACAGAAAGCGTTTCAAAGAAATGAAGGACATGCATGGAAGTAGTAGCCGTGATGATCGGCAAAAAAGAGAACAGCAGCGTCAAGAGAGAGAAATGGCTAAGTTTGCCCAAATGGCTGATGCTCAAAAGCAGCAACAGCTTCAACAGCAACACGAAGAATCTGGATCTGCTCCAGTTTCCTCCGAATCTAGAACTGCTACTGCACTTGCAGATCAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCCTCCAAGGGAAGTGCTTCCAAGAACTCATTCGGCGGCGCTGCAAAGAAGCAAAAAGTGGCCATATCTTCTATATTCAATACCGATGCGGATGAAGAATAA 897 0.4314 MDYPWTSGGRETGTIDRSQIRKGKESFIEDWAEDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENMRKREVLAEREQKIQTEVKEIRKVFFCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSSRDDRQKREQQRQEREMAKFAQMADAQKQQQLQQQHEESGSAPVSSESRTATALADQDQRKTLKFGFSSKGSASKNSFGGAAKKQKVAISSIFNTDADEE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4249 298 MobiDBLite consensus disorder prediction 191 219 - -
Prci1g4249 298 ProSiteProfiles G-patch domain profile. 63 108 IPR000467 GO:0003676
Prci1g4249 298 SMART G-patch_5 61 106 IPR000467 GO:0003676
Prci1g4249 298 ProSitePatterns Zinc finger C2H2 type domain signature. 160 182 IPR013087 -
Prci1g4249 298 MobiDBLite consensus disorder prediction 222 277 - -
Prci1g4249 298 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 298 - -
Prci1g4249 298 Pfam Zinc-finger double-stranded RNA-binding 158 185 IPR022755 -
Prci1g4249 298 Pfam G-patch domain 64 104 IPR000467 GO:0003676
Prci1g4249 298 Coils Coil 113 140 - -
Prci1g4249 298 MobiDBLite consensus disorder prediction 191 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4249 Prci-Chr1 57097300 57101098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4249 25 298 C2H2 Transcription Factor Family AT5G26610 71.119 8.08e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4249 - - jre:108987907 421.394