Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4248 ATGGATTATCCATGGACCAGTGGTGGGCGGGAAACTGGTACCATTGATAGGAGCCAAATCAGAAAGGGGAAGGAATCCTTTATCGAGGATTGGGCAGAGGATTTTCGGTTGCCTATCAATCACAGGCCAACAGAAAATGTTGATCTGGACAATGTTGAACAGGCATCTTTGGACACGCAGTTAACATCGTCTAATATTGGATTTAAGCTACTTCAAAAGATGGGATGGAAAGGAAAGGGTTTGGGGAAGAACGAGCAAGGAATTATTGAGCCAATAAAATCTGGTATTAGAGATCCCAGATTGGGTGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACGTCCAGCGAAAGAAACTTGATATCGAGCTGGAGGAGACAGAAGAAAATATGAGGAAGCGAGAGAAGGCAGCATATAGCACATATGCATGTCTTTTGATGGGATTGGTGTGTCTTAGGGAACCATCAACTTTGGAAGAACGTGAGCAAAAAATTCAAACTGAAGTCAAAGAAATTCGGAAGGTGTTTTTTTGTGATCTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCTCACTTGAGCTCATACGATCACAATCACAGAAAGCGTTTCAAAGAAATGAAGGACATGCATGGAAGTAGTAGCCGTGATGATCGGCAAAAAAGAGAACAGCAGCGTCAAGAGAGAGAAATGGCTAAGTTTGCCCAAATGGCTGATGCTCAAAAGCAGCAACAGCTTCAACAGCAACACGAAGAATCTGGATCTGCTCCAGTTTCCTCCGAATCTAGAACTGCTACTGCACTTGCAGATCAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCCTCCAAGGGAAGTGCTTCCAAGAACTCATTCGGCGGCGCTGCAAAGAAGCAAAAAGTGGCCATATCTTCTATATTCAATACCGATGCGGATGAAGAATAA 960 0.4302 MDYPWTSGGRETGTIDRSQIRKGKESFIEDWAEDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENMRKREKAAYSTYACLLMGLVCLREPSTLEEREQKIQTEVKEIRKVFFCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSSRDDRQKREQQRQEREMAKFAQMADAQKQQQLQQQHEESGSAPVSSESRTATALADQDQRKTLKFGFSSKGSASKNSFGGAAKKQKVAISSIFNTDADEE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4248 319 MobiDBLite consensus disorder prediction 212 307 - -
Prci1g4248 319 MobiDBLite consensus disorder prediction 243 298 - -
Prci1g4248 319 Pfam G-patch domain 64 104 IPR000467 GO:0003676
Prci1g4248 319 ProSitePatterns Zinc finger C2H2 type domain signature. 181 203 IPR013087 -
Prci1g4248 319 ProSiteProfiles G-patch domain profile. 63 108 IPR000467 GO:0003676
Prci1g4248 319 SMART G-patch_5 61 106 IPR000467 GO:0003676
Prci1g4248 319 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 319 - -
Prci1g4248 319 Coils Coil 113 140 - -
Prci1g4248 319 MobiDBLite consensus disorder prediction 212 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4248 Prci-Chr1 57097300 57101098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4248 7 319 C2H2 Transcription Factor Family AT5G26610 62.658 9.50e-120 345