Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4246 ATGGATTATCCATGGACCAGTGGTGGGCGGGAAACTGGTACCATTGATAGGAGCCAAATCAGAAAGGGGAAGGAATCCTTTATCGAGGATTGGGCAGAGGATTTTCGGTTGCCTATCAATCACAGGCCAACAGAAAATGTTGATCTGGACAATGTTGAACAGGCATCTTTGGACACGCAGTTAACATCGTCTAATATTGGATTTAAGCTACTTCAAAAGATGGGATGGAAAGGAAAGGGTTTGGGGAAGAACGAGCAAGGAATTATTGAGCCAATAAAATCTGGTATTAGAGATCCCAGATTGGGTGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACGTCCAGCGAAAGAAACTTGATATCGAGCTGGAGGAGACAGAAGAAAATATGAGGAAGCGAGAGCAGAAGGCAGCATATAGCACATATGCATGTCTTTTGATGGGATTGGTGTGTCTTAGGGAACCATCAACTTTGGAAGAACGTGAGCAAAAAATTCAAACTGAAGTCAAAGAAATTCGGAAGGTGTTTTTTTGTGATCTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCTCACTTGAGCTCATACGATCACAATCACAGAAAGCGTTTCAAAGAAATGAAGGACATGCATGGAAGTAGTAGCCGTGATGATCGGCAAAAAAGAGAACAGCAGCGTCAAGAGAGAGAAATGGCTAAGTTTGCCCAAATGGCTGATGCTCAAAAGCAGCAACAGCTTCAACAGCAACACGAAGAATCTGGATCTGCTCCAGTTTCCTCCGAATCTAGAACTGCTACTGCACTTGCAGATCAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCCTCCAAGGGAAGTGCTTCCAAGAACTCATTCGGCGGCGCTGCAAAGAAGCAAAAAGTGGCCATATCTTCTATATTCAATACCGATGCGGATGAAGAATAA 963 0.4309 MDYPWTSGGRETGTIDRSQIRKGKESFIEDWAEDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENMRKREQKAAYSTYACLLMGLVCLREPSTLEEREQKIQTEVKEIRKVFFCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSSRDDRQKREQQRQEREMAKFAQMADAQKQQQLQQQHEESGSAPVSSESRTATALADQDQRKTLKFGFSSKGSASKNSFGGAAKKQKVAISSIFNTDADEE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4246 320 ProSitePatterns Zinc finger C2H2 type domain signature. 182 204 IPR013087 -
Prci1g4246 320 Pfam G-patch domain 64 104 IPR000467 GO:0003676
Prci1g4246 320 ProSiteProfiles G-patch domain profile. 63 108 IPR000467 GO:0003676
Prci1g4246 320 SMART G-patch_5 61 106 IPR000467 GO:0003676
Prci1g4246 320 MobiDBLite consensus disorder prediction 213 241 - -
Prci1g4246 320 MobiDBLite consensus disorder prediction 213 308 - -
Prci1g4246 320 MobiDBLite consensus disorder prediction 244 299 - -
Prci1g4246 320 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 320 - -
Prci1g4246 320 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4246 Prci-Chr1 57097300 57101381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4246 7 320 C2H2 Transcription Factor Family AT5G26610 62.461 1.35e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4246 - - jre:108987907 405.216