Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4235 ATGGTGCTGCTGCTAAAGGAGCAGTCTGTTTGGATGGAACATTACCTGGTTATCATTTGCATCGAGGATATGGATCCGGAACAAACAGCTGGCTCATTCACTTGGAGTGTTAGATCATGTGTTTTCCGGAAGACAACGAGACGTGGATCGTCGAATTTCATGGAACAGGAACTCCTTTTTACGGGAATATTAAGCAATAATGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGGGTGAGGCTTCGTTATTGTGATGGTGGTTCTTTCACCGGGGATAGTGAAAACAAGAATGCTACGCTGAAATTTAGAGGACAACGCATTTGGTTGGCCGCAATGGAAGATTTGCTGTTAAATGGAATGCGTCACGCCAAGCAGGCCATTCTTTCTGGATGCTCAGCTGGTGGTCTGGCTGCTATTATACACTGTGATAAATTTCATGGTCTATTTCCGAGTACTACTAGAGTGAAATGTTTGAGTGATGCTGGGTTATTTCTTGATGTGGCTGACGTCTCAGGTCGTCGTACTCTCAGAAATCTATATGGTGGTGTTGTAGGATTGCAGGGGATGCGTAAGAATCTGCCACGCATTTGTACCAGCAGCCTTGATCCCACTTCATGTTTCTTCCCTCAGAACTTGATTGCCAGTGTTAGAACCCCACTATTCATTCTCAATGCTGCCTATGATACGTGGCAGATACAATCCAGCATCGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATCATTGCAGATTAAACCATGATAAATGTACTAGAAATCAGATCAACTTTCTGCAAGGATTCAGAAATCACATGTTGGATGCCATTGAAGACTTCTCAAGATCAAGTCATAACGGATTGTTTATAAATTCTTGTTTTTCTCACTGCCAAACCGAGAGGCAGGATACATGGTTTGCCCATAATTCTCCTGTCATTGGGAAAAAGGCAATTGCTGAGGCCGTCGGAGATTGGTATTTTGAACGAGCAGGTGTGAAGGCCATTGATTGTGCTTACCCTTGCGATCAGACATGCCACCATCTGGTTTTCGAATGA 1056 0.4394 MVLLLKEQSVWMEHYLVIICIEDMDPEQTAGSFTWSVRSCVFRKTTRRGSSNFMEQELLFTGILSNNAEQNPDFFNWNRVRLRYCDGGSFTGDSENKNATLKFRGQRIWLAAMEDLLLNGMRHAKQAILSGCSAGGLAAIIHCDKFHGLFPSTTRVKCLSDAGLFLDVADVSGRRTLRNLYGGVVGLQGMRKNLPRICTSSLDPTSCFFPQNLIASVRTPLFILNAAYDTWQIQSSIAPPSADPHGYWHHCRLNHDKCTRNQINFLQGFRNHMLDAIEDFSRSSHNGLFINSCFSHCQTERQDTWFAHNSPVIGKKAIAEAVGDWYFERAGVKAIDCAYPCDQTCHHLVFE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4235 351 PANTHER NOTUM-RELATED 31 347 IPR004963 GO:0016787
Prci1g4235 351 Pfam Pectinacetylesterase 34 330 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4235 Prci-Chr1 56951365 56955598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4235 30 351 Carbohydrate Esterase AT1G57590 68.323 2.19e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4235 K19882 - gmx:100782401 547.354