Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4234 ATGGTGCTGCTGCTAAAGGAGCAGTCTGTTTGGATGGAACATTACCTGGTTATCATTTGCATCGAGGATATGGATCCGGAACAAACAGCTGGCTCATTCACTTGGAGTAGTGTTAGATCATGTGTTTTCCGGAAGACAACGAGACGTGGATCGTCGAATTTCATGGAACAGGAACTCCTTTTTACGGGAATATTAAGCAATAATGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGGGTGAGGCTTCGTTATTGTGATGGTGGTTCTTTCACCGGGGATAGTGAAAACAAGAATGCTACGCTGAAATTTAGAGGACAACGCATTTGGTTGGCCGCAATGGAAGATTTGCTGTTAAATGGAATGCGTCACGCCAAGCAGGCCATTCTTTCTGGATGCTCAGCTGGTGGTCTGGCTGCTATTATACACTGTGATAAATTTCATGGTCTATTTCCGAGTACTACTAGAGTGAAATGTTTGAGTGATGCTGGGTTATTTCTTGATGTGGCTGACGTCTCAGGTCGTCGTACTCTCAGAAATCTATATGGTGGTGTTGTAGGATTGCAGGGGATGCGTAAGAATCTGCCACGCATTTGTACCAGCAGCCTTGATCCCACTTCATGTTTCTTCCCTCAGAACTTGATTGCCAGTGTTAGAACCCCACTATTCATTCTCAATGCTGCCTATGATACGTGGCAGATACAATCCAGCATCGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATCATTGCAGATTAAACCATGATAAATGTACTAGAAATCAGATCAACTTTCTGCAAGGATTCAGAAATCACATGTTGGATGCCATTGAAGACTTCTCAAGATCAAGTCATAACGGATTGTTTATAAATTCTTGTTTTTCTCACTGCCAAACCGAGAGGCAGGATACATGGTTTGCCCATAATTCTCCTGTCATTGGGAAAAAGGCAATTGCTGAGGCCGTCGGAGATTGGTATTTTGAACGAGCAGGTGTGAAGGCCATTGATTGTGCTTACCCTTGCGATCAGACATGCCACCATCTGGTTTTCGAATGA 1059 0.4391 MVLLLKEQSVWMEHYLVIICIEDMDPEQTAGSFTWSSVRSCVFRKTTRRGSSNFMEQELLFTGILSNNAEQNPDFFNWNRVRLRYCDGGSFTGDSENKNATLKFRGQRIWLAAMEDLLLNGMRHAKQAILSGCSAGGLAAIIHCDKFHGLFPSTTRVKCLSDAGLFLDVADVSGRRTLRNLYGGVVGLQGMRKNLPRICTSSLDPTSCFFPQNLIASVRTPLFILNAAYDTWQIQSSIAPPSADPHGYWHHCRLNHDKCTRNQINFLQGFRNHMLDAIEDFSRSSHNGLFINSCFSHCQTERQDTWFAHNSPVIGKKAIAEAVGDWYFERAGVKAIDCAYPCDQTCHHLVFE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4234 352 PANTHER NOTUM-RELATED 36 348 IPR004963 GO:0016787
Prci1g4234 352 Pfam Pectinacetylesterase 31 331 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4234 Prci-Chr1 56951365 56955598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4234 37 352 Carbohydrate Esterase AT1G57590 69.304 2.56e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4234 K19882 - gmx:100782401 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4234 1 56951365 56955598 Prci3g3635 3 45759713 45764791 ECH
Prci1g4234 1 56951365 56955598 Prci1g4234 1 56951365 56955598 ECH
Prci3g3635 3 45759713 45764791 Prci1g4234 1 56951365 56955598 ECH