Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4233 ATGGCGAACCTCGTGTGGGTTGGCATTTTCATAGGACTTGCTTTTAGCGAATGGGTTAATGGGTTCGCCGACTATCACCTCAACGAAACAGAGCTGTCTTTGTTGGAGGCTCATGAAGCATCCTTGGTTGGCCCCAATCCCCTGCTCGTAGGACTTACCCTCATTCATGGTGCTGCTGCTAAAGGAGCAGTCTGTTTGGATGGAACATTACCTGGTTATCATTTGCATCGAGGATATGGATCCGGAACAAACAGCTGGCTCATTCACTTGGAGGGAGGTGGTTGGTGTAGTAGTGTTAGATCATGTGTTTTCCGGAAGACAACGAGACGTGGATCGTCGAATTTCATGGAACAGGAACTCCTTTTTACGGGAATATTAAGCAATAATGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGGGTGAGGCTTCGTTATTGTGATGGTGGTTCTTTCACCGGGGATAGTGAAAACAAGAATGCTACGCTGAAATTTAGAGGACAACGCATTTGGTTGGCCGCAATGGAAGATTTGCTGTTAAATGGAATGCGTCACGCCAAGCAGGCCATTCTTTCTGGATGCTCAGCTGGTGGTCTGGCTGCTATTATACACTGTGATAAATTTCATGGTCTATTTCCGAGTACTACTAGAGTGAAATGTTTGAGTGATGCTGGGTTATTTCTTGATGTGGCTGACGTCTCAGGTCGTCGTACTCTCAGAAATCTATATGGTGGTGTTGTAGGATTGCAGGGGATGCGTAAGAATCTGCCACGCATTTGTACCAGCAGCCTTGATCCCACTTCATGTTTCTTCCCTCAGAACTTGATTGCCAGTGTTAGAACCCCACTATTCATTCTCAATGCTGCCTATGATACGTGGCAGATACAATCCAGCATCGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATCATTGCAGATTAAACCATGATAAATGTACTAGAAATCAGATCAACTTTCTGCAAGGATTCAGAAATCACATGTTGGATGCCATTGAAGACTTCTCAAGATCAAGTCATAACGGATTGTTTATAAATTCTTGTTTTTCTCACTGCCAAACCGAGAGGCAGGATACATGGTTTGCCCATAATTCTCCTGTCATTGGGAAAAAGGCAATTGCTGAGGCCGTCGGAGATTGGTATTTTGAACGAGCAGGTGTGAAGGCCATTGATTGTGCTTACCCTTGCGATCAGACATGCCACCATCTGGTTTTCGAATGA 1242 0.4501 MANLVWVGIFIGLAFSEWVNGFADYHLNETELSLLEAHEASLVGPNPLLVGLTLIHGAAAKGAVCLDGTLPGYHLHRGYGSGTNSWLIHLEGGGWCSSVRSCVFRKTTRRGSSNFMEQELLFTGILSNNAEQNPDFFNWNRVRLRYCDGGSFTGDSENKNATLKFRGQRIWLAAMEDLLLNGMRHAKQAILSGCSAGGLAAIIHCDKFHGLFPSTTRVKCLSDAGLFLDVADVSGRRTLRNLYGGVVGLQGMRKNLPRICTSSLDPTSCFFPQNLIASVRTPLFILNAAYDTWQIQSSIAPPSADPHGYWHHCRLNHDKCTRNQINFLQGFRNHMLDAIEDFSRSSHNGLFINSCFSHCQTERQDTWFAHNSPVIGKKAIAEAVGDWYFERAGVKAIDCAYPCDQTCHHLVFE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4233 413 Pfam Pectinacetylesterase 48 392 IPR004963 GO:0016787
Prci1g4233 413 PANTHER NOTUM-RELATED 48 409 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4233 Prci-Chr1 56951040 56955598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4233 49 413 Carbohydrate Esterase AT1G57590 70.685 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4233 K19882 - gmx:100788448 686.411