Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4222 ATGGAACAAAAGAACATGGAATACGATATAGAACTCTGGGCAAGAAGAAATGATGAGTTATTTGGTTTGAAGTCTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAACAGCAACCCCCTGTTGAAGCTCCTTATGTTCCTCAGAATGTGGTCAAATCTACCAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGTTGAGCTGGCAAAGCGTACTGGAAAGTCAGTATCTTCTCTGCAAGATATTCTGGTAAATATTGGGGAAAAAGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAGCTTGTTGCGATGGAAGTTGGTGTCAATGTTAAGAGGCTACATTCTACTGAAGGTACAGAGATTTTACCACGGCCTGCAGTTGTAACAGTGATGGGTCACGTTGACCATGGTAAAACCTCCCTTCTTGATGCTTTGCGTCAAACATCAGTAGCAGCCAAGGAGGCTGGGGGCATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCTGGAGCATCAATCACATTTCTGGACACACCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTCACAGATGTGGTAGTGCTTGTGGTTGCTGCAGATGATGGTGTGATGCCTCAGACACTTGAAGCTATATCCCACGCGAAAGCAGCTAATGTACCAGTAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAAAGAGTAAAGCTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCTGCAATTATGAAAACTGGACTGGATAACTTAGAGGAAGCTTTGCTCCTTCAGGCTGAAATGATGGATCTGAAGGCTCGAATTGATGGCCCTGCTCAAGCTTATGTGGTGGAAGCTAGACTTGATAAAGGACGAGGTCCATTAGCTACTGCTATTGTGAAGGCAGGGACTCTAGTTTGTGGTCAGCATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACAGGTAAGTTGACTGACAGAGCAACACCTGCTATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCATTCAGAAGAGCGAGCACGATTGCTTAGTGCTGGCAGGAAAAGGAAATATGAGGAGGATAGGCTTAAGAAAATGGTCCAGGAAAAGACAGATTCTATGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCAATAGTAGTGAAAGCTGATGTTCAGGGAACTGTCCAAGCTGTTACAGATGCATTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGGTTCAATGTGAAGAGTCCACCTAGTCCTGTCACTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTGCTGCACCGTGTGATTTACCACCTCTTGGAGGAGATGGGGAATTTGATAATAGAGAAGGCCCCAGGGACGTTTGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGAGCATATTTGAGCTTAAAGGGAGGAGCAAGTCCAAGGGGCCTGATGTGAAGATAGCCGGCTGTCGGGTCACCGACGGTTGTGTGACAAAATCAGGAATCATGAGGCTTCTGAGGAGCGGGGAAGTGATGTTTGAAGGTAACTGTGCGTCCCTGAGAAGAGAAACGCAGGACGTAGAGACTGTGAAGAAGGGAAGTGAGTGTGGGCTTGTAATAAGTGACTGGCGCGATTTCCAGGTTGGAGACGTCATACAGTGTTTGGAACAAGTGGTGAGGAAGCCCAAGTTCATTAAGTCGCAGAGTGGTGCTGTTCGAATTGAGTGTTGA 1962 0.4659 MEQKNMEYDIELWARRNDELFGLKSPKKEKRVRRDSKQQPPVEAPYVPQNVVKSTKSVPDKTIEIFEGMTIVELAKRTGKSVSSLQDILVNIGEKVESEFEPLSVDIAELVAMEVGVNVKRLHSTEGTEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPVVVAINKCDKPGANPERVKLQLASEGLLLEEMGGDVQVVEVSAIMKTGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLATAIVKAGTLVCGQHVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVHSEERARLLSAGRKRKYEEDRLKKMVQEKTDSMESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPSPVTQAAGRANIKIVLHRVIYHLLEEMGNLIIEKAPGTFETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVTDGCVTKSGIMRLLRSGEVMFEGNCASLRRETQDVETVKKGSECGLVISDWRDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4222 653 CDD IF2_mtIF2_II 308 403 IPR044145 -
Prci1g4222 653 Gene3D - 130 304 IPR027417 -
Prci1g4222 653 CDD IF2_eIF5B 136 299 - -
Prci1g4222 653 NCBIfam translation initiation factor IF-2 60 636 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci1g4222 653 MobiDBLite consensus disorder prediction 24 44 - -
Prci1g4222 653 SUPERFAMILY Translation proteins 536 638 IPR009000 -
Prci1g4222 653 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 33 648 IPR015760 -
Prci1g4222 653 MobiDBLite consensus disorder prediction 24 38 - -
Prci1g4222 653 FunFam Translation initiation factor IF-2 428 535 - -
Prci1g4222 653 Hamap Translation initiation factor IF-2 [infB]. 7 639 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci1g4222 653 Gene3D Translation factors 535 638 - -
Prci1g4222 653 CDD mtIF2_IVc 541 631 - -
Prci1g4222 653 Gene3D Translation factors 305 423 - -
Prci1g4222 653 Gene3D - 429 533 IPR036925 -
Prci1g4222 653 Pfam Translation-initiation factor 2 409 523 IPR023115 -
Prci1g4222 653 SUPERFAMILY Translation proteins 306 388 IPR009000 -
Prci1g4222 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 302 IPR027417 -
Prci1g4222 653 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 132 302 IPR000795 GO:0003924|GO:0005525
Prci1g4222 653 FunFam Translation initiation factor IF-2 536 640 - -
Prci1g4222 653 FunFam Translation initiation factor IF-2 129 304 - -
Prci1g4222 653 NCBIfam small GTP-binding protein domain 135 282 IPR005225 GO:0005525
Prci1g4222 653 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 412 541 IPR036925 -
Prci1g4222 653 Pfam Elongation factor Tu GTP binding domain 137 293 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4222 Prci-Chr1 56890055 56894243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4222 133 617 Eukaryotic Initiation Factors Gene Family AT1G21160 27.158 1.60e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4222 K02519 - zju:107430122 1015.76