Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4218 ATGGCGTGGAGAGAGCTTGGAAGAAAGAGACTATATATGAACTTTGCCAGAGCTCTGGCTTTAGTGCCATCTAGGCATGTTGCAAGGTCATGCTCTTCATCTACCTTTGCAGCAAAATCTGCTTATGCATCAGCAGGATGCTTAACTGGAGCAGCTGGTTTTTGCAATGGAACAAAAGAACATGGAATACGATATAGGTGGTTCCGTGCTAATCCAGAACTCTGGGCAAGAAGAAATGATGAGTTATTTGGTTTGAAGTCTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAACAGCAACCCCCTGTTGAAGCTCCTTATGTTCCTCAGAATGTGGTCAAATCTACCAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGTTGAGCTGGCAAAGCGTACTGGAAAGTCAGTATCTTCTCTGCAAGATATTCTGGTAAATATTGGGGAAAAAGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAGCTTGTTGCGATGGAAGTTGGTGTCAATGTTAAGAGGCTACATTCTACTGAAGGTACAGAGATTTTACCACGGCCTGCAGTTGTAACAGTGATGGGTCACGTTGACCATGGTAAAACCTCCCTTCTTGATGCTTTGCGTCAAACATCAGTAGCAGCCAAGGAGGCTGGGGGCATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCTGGAGCATCAATCACATTTCTGGACACACCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTCACAGATGTGGTAGTGCTTGTGGTTGCTGCAGATGATGGTGTGATGCCTCAGACACTTGAAGCTATATCCCACGCGAAAGCAGCTAATGTACCAGTAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAAAGAGTAAAGCTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCTGCAATTATGAAAACTGGACTGGATAACTTAGAGGAAGCTTTGCTCCTTCAGGCTGAAATGATGGATCTGAAGGCTCGAATTGATGGCCCTGCTCAAGCTTATGTGGTGGAAGCTAGACTTGATAAAGGACGAGGTCCATTAGCTACTGCTATTGTGAAGGCAGGGACTCTAGTTTGTGGTCAGCATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACAGGTAAGTTGACTGACAGAGCAACACCTGCTATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCATTCAGAAGAGCGAGCACGATTGCTTAGTGCTGGCAGGAAAAGGAAATATGAGGAGGATAGGCTTAAGAAAATGGTCCAGGAAAAGACAGATTCTATGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCAATAGTAGTGAAAGCTGATGTTCAGGGAACTGTCCAAGCTGTTACAGATGCATTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGGTTCAATGTGAAGAGTCCACCTAGTCCTGTCACTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTGCTGCACCGTGTGATTTACCACCTCTTGGAGGAGATGGGGAATTTGATAATAGAGAAGGCCCCAGGGACGTTTGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGAGCATATTTGAGCTTAAAGGGAGGAGCAAGTCCAAGGGGCCTGATGTGAAGATAGCCGGCTGTCGGGTCACCGACGGTTGTGTGACAAAATCAGGAATCATGAGGCTTCTGAGGAGCGGGGAAGTGATGTTTGAAGGTAACTGTGCGTCCCTGAGAAGAGAAACGCAGGACGTAGAGACTGTGAAGAAGGGAAGTGAGTGTGGGCTTGTAATAAGTGACTGGCGCGATTTCCAGGTTGGAGACGTCATACAGTGTTTGGAACAAGTGGTGAGGAAGCCCAAGTTCATTAAGTCGCAGAGTGGTGCTGTTCGAATTGAGTGTTGA 2148 0.466 MAWRELGRKRLYMNFARALALVPSRHVARSCSSSTFAAKSAYASAGCLTGAAGFCNGTKEHGIRYRWFRANPELWARRNDELFGLKSPKKEKRVRRDSKQQPPVEAPYVPQNVVKSTKSVPDKTIEIFEGMTIVELAKRTGKSVSSLQDILVNIGEKVESEFEPLSVDIAELVAMEVGVNVKRLHSTEGTEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPVVVAINKCDKPGANPERVKLQLASEGLLLEEMGGDVQVVEVSAIMKTGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLATAIVKAGTLVCGQHVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVHSEERARLLSAGRKRKYEEDRLKKMVQEKTDSMESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPSPVTQAAGRANIKIVLHRVIYHLLEEMGNLIIEKAPGTFETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVTDGCVTKSGIMRLLRSGEVMFEGNCASLRRETQDVETVKKGSECGLVISDWRDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4218 715 FunFam Translation initiation factor IF-2 490 597 - -
Prci1g4218 715 FunFam Translation initiation factor IF-2 191 366 - -
Prci1g4218 715 Pfam Translation-initiation factor 2 471 585 IPR023115 -
Prci1g4218 715 Pfam Elongation factor Tu GTP binding domain 199 355 IPR000795 GO:0003924|GO:0005525
Prci1g4218 715 Hamap Translation initiation factor IF-2 [infB]. 8 701 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci1g4218 715 MobiDBLite consensus disorder prediction 86 105 - -
Prci1g4218 715 MobiDBLite consensus disorder prediction 86 100 - -
Prci1g4218 715 Gene3D Translation factors 597 700 - -
Prci1g4218 715 CDD IF2_mtIF2_II 370 465 IPR044145 -
Prci1g4218 715 FunFam Translation initiation factor IF-2 598 702 - -
Prci1g4218 715 Gene3D - 491 595 IPR036925 -
Prci1g4218 715 CDD IF2_eIF5B 198 361 - -
Prci1g4218 715 SUPERFAMILY Translation proteins 598 700 IPR009000 -
Prci1g4218 715 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 194 364 IPR000795 GO:0003924|GO:0005525
Prci1g4218 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 364 IPR027417 -
Prci1g4218 715 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 89 710 IPR015760 -
Prci1g4218 715 Gene3D Translation factors 367 485 - -
Prci1g4218 715 SUPERFAMILY Translation proteins 368 450 IPR009000 -
Prci1g4218 715 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 474 603 IPR036925 -
Prci1g4218 715 NCBIfam translation initiation factor IF-2 122 698 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci1g4218 715 CDD mtIF2_IVc 603 693 - -
Prci1g4218 715 Gene3D - 192 366 IPR027417 -
Prci1g4218 715 NCBIfam small GTP-binding protein domain 197 344 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4218 Prci-Chr1 56889111 56894243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4218 195 679 Eukaryotic Initiation Factors Gene Family AT1G21160 27.158 2.14e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4218 K02519 - qsa:O6P43_014736 1068.14