Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4217 ATGGCGTGGAGAGAGCTTGGAAGAAAGAGACTATATATGAACTTTGCCAGAGCTCTGGCTTTAGTGCCATCTAGGCATGTTGCAAGGTCATGCTCTTCATCTACCTTTGCAGCAAAATCTGCTTATGCATCAGCAGGATGCTTAACTGGAGCAGCTGGTTTTTGCAATGGAACAAAAGAACATGGAATACGATATAGTAGGTGGTTCCGTGCTAATCCAGAACTCTGGGCAAGAAGAAATGATGAGTTATTTGGTTTGAAGTCTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAACAGCAACCCCCTGTTGAAGCTCCTTATGTTCCTCAGAATGTGGTCAAATCTACCAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGTTGAGCTGGCAAAGCGTACTGGAAAGTCAGTATCTTCTCTGCAAGATATTCTGGTAAATATTGGGGAAAAAGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAGCTTGTTGCGATGGAAGTTGGTGTCAATGTTAAGAGGCTACATTCTACTGAAGGTACAGAGATTTTACCACGGCCTGCAGTTGTAACAGTGATGGGTCACGTTGACCATGGTAAAACCTCCCTTCTTGATGCTTTGCGTCAAACATCAGTAGCAGCCAAGGAGGCTGGGGGCATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCTGGAGCATCAATCACATTTCTGGACACACCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTCACAGATGTGGTAGTGCTTGTGGTTGCTGCAGATGATGGTGTGATGCCTCAGACACTTGAAGCTATATCCCACGCGAAAGCAGCTAATGTACCAGTAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAAAGAGTAAAGCTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCTGCAATTATGAAAACTGGACTGGATAACTTAGAGGAAGCTTTGCTCCTTCAGGCTGAAATGATGGATCTGAAGGCTCGAATTGATGGCCCTGCTCAAGCTTATGTGGTGGAAGCTAGACTTGATAAAGGACGAGGTCCATTAGCTACTGCTATTGTGAAGGCAGGGACTCTAGTTTGTGGTCAGCATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACAGGTAAGTTGACTGACAGAGCAACACCTGCTATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCATTCAGAAGAGCGAGCACGATTGCTTAGTGCTGGCAGGAAAAGGAAATATGAGGAGGATAGGCTTAAGAAAATGGTCCAGGAAAAGACAGATTCTATGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCAATAGTAGTGAAAGCTGATGTTCAGGGAACTGTCCAAGCTGTTACAGATGCATTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGGTTCAATGTGAAGAGTCCACCTAGTCCTGTCACTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTGCTGCACCGTGTGATTTACCACCTCTTGGAGGAGATGGGGAATTTGATAATAGAGAAGGCCCCAGGGACGTTTGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGAGCATATTTGAGCTTAAAGGGAGGAGCAAGTCCAAGGGGCCTGATGTGAAGATAGCCGGCTGTCGGGTCACCGACGGTTGTGTGACAAAATCAGGAATCATGAGGCTTCTGAGGAGCGGGGAAGTGATGTTTGAAGGTAACTGTGCGTCCCTGAGAAGAGAAACGCAGGACGTAGAGACTGTGAAGAAGGGAAGTGAGTGTGGGCTTGTAATAAGTGACTGGCGCGATTTCCAGGTTGGAGACGTCATACAGTGTTTGGAACAAGTGGTGAGGAAGCCCAAGTTCATTAAGTCGCAGAGTGGTGCTGTTCGAATTGAGTGTTGA 2151 0.4658 MAWRELGRKRLYMNFARALALVPSRHVARSCSSSTFAAKSAYASAGCLTGAAGFCNGTKEHGIRYSRWFRANPELWARRNDELFGLKSPKKEKRVRRDSKQQPPVEAPYVPQNVVKSTKSVPDKTIEIFEGMTIVELAKRTGKSVSSLQDILVNIGEKVESEFEPLSVDIAELVAMEVGVNVKRLHSTEGTEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPVVVAINKCDKPGANPERVKLQLASEGLLLEEMGGDVQVVEVSAIMKTGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLATAIVKAGTLVCGQHVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVHSEERARLLSAGRKRKYEEDRLKKMVQEKTDSMESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPSPVTQAAGRANIKIVLHRVIYHLLEEMGNLIIEKAPGTFETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVTDGCVTKSGIMRLLRSGEVMFEGNCASLRRETQDVETVKKGSECGLVISDWRDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4217 716 Pfam Translation-initiation factor 2 472 586 IPR023115 -
Prci1g4217 716 SUPERFAMILY Translation proteins 369 451 IPR009000 -
Prci1g4217 716 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 475 604 IPR036925 -
Prci1g4217 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 365 IPR027417 -
Prci1g4217 716 CDD mtIF2_IVc 604 694 - -
Prci1g4217 716 Gene3D Translation factors 598 701 - -
Prci1g4217 716 FunFam Translation initiation factor IF-2 491 598 - -
Prci1g4217 716 Pfam Elongation factor Tu GTP binding domain 200 356 IPR000795 GO:0003924|GO:0005525
Prci1g4217 716 SUPERFAMILY Translation proteins 599 701 IPR009000 -
Prci1g4217 716 CDD IF2_eIF5B 199 362 - -
Prci1g4217 716 Gene3D - 193 367 IPR027417 -
Prci1g4217 716 Gene3D Translation factors 368 486 - -
Prci1g4217 716 Hamap Translation initiation factor IF-2 [infB]. 8 702 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci1g4217 716 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 90 711 IPR015760 -
Prci1g4217 716 FunFam Translation initiation factor IF-2 192 367 - -
Prci1g4217 716 NCBIfam small GTP-binding protein domain 198 345 IPR005225 GO:0005525
Prci1g4217 716 NCBIfam translation initiation factor IF-2 123 699 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Prci1g4217 716 MobiDBLite consensus disorder prediction 87 106 - -
Prci1g4217 716 MobiDBLite consensus disorder prediction 87 101 - -
Prci1g4217 716 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 195 365 IPR000795 GO:0003924|GO:0005525
Prci1g4217 716 Gene3D - 492 596 IPR036925 -
Prci1g4217 716 FunFam Translation initiation factor IF-2 599 703 - -
Prci1g4217 716 CDD IF2_mtIF2_II 371 466 IPR044145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4217 Prci-Chr1 56889111 56894243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4217 196 680 Eukaryotic Initiation Factors Gene Family AT1G21160 27.158 2.19e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4217 K02519 - qsa:O6P43_014736 1064.68