Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4193 ATGGGTAACGGCACTTCACGTGTTGTTGGCTGTTTAGTGCCATTTAACGGCAAAAATGGAGTTGATTTGGAGTTCCTAGAGCCATTGGACGAAGGATTAGGCCATTCTTTCTGTTATGTGAGGCCATCTATTTTTGAATCTCCTGCCATTACGCCATCAAACTCTGAGAGGTTTACTGTTGATTCGAGTACCCTTGATTCTGAAACATTCAGTGGATCGTTTAGGCATGACGGTATAGAAGATCCCTCTGGCATACACAAGCCAGCCAAGTGCTTCCCAGAAACCACATTCAAAACGATTTCAGGGGCTTCAGTCAGTGCCAATGTCTCAACCGCAAGAACGGGTAACCAGAGTGCATTATTTGCTAGTGATATCCTAGAGCCAGCTGCATCATTTGAAGGAACCTCTTCATTTGCTGCAATACCTTTGCAACCTGTTCCCCGCGGTTCTGGAACTTCAAATGGTTTCATGTCTGGACCTCTTGAGAGAGGTTTTGCTTCAGGTCCATTGGATAGGGGTGGTGGTGGTTTCATGTCTGGACCAATAGAGAAGGGGGTCATGTCAGGTCCTCTTGATTCTACTGACAAATCCAACTTTTCTGCACCGCTTGCACGAGGCGGTCATAGGCCACGTCTCCAACAGCTCATGAGAAGTGTGAGTGGACCGATGAAAAACACTTTTTCTCGGACCTTCTCCAAGCATTCTAGCAGCAGCAGCTGGATGCAGCGGCTGTTCTTTCACCCGGTGACCCAATTGGCTTGGCATTCCAAAGATGCAAAGTTTCGACAAGAAGTCTCAAGAAACTGTGTTGAAGTTGGGCCATCTGAAGGGGAGTATAAGCATTCACACAATTTACAGTGGGCTCATGGCAAGGCCGGTGAAGATAGGGTCCATGTAGTACTTTCTGAAGAACAAGGGTGGTTGTTTATAGGGATATATGATGGTTTTAGTGGACCAGATGCTCCTGATTTTTTGATGAACCATCTTTATAAATTTGTAGACAAAGAACTGGAGGGGTTGCTTTGGGATTATGAAGTTAATTCTGTAGATGCGCTTCAACCTGAAGTCCCTAAAACTGGAAATGCTGCAGTTGCTGCCGAGTACAGCCGGGAGGAACTGTCAGTTAATCATACTAGTTCAAATCAAGATACTTTGTGTTGTTTGGAAGCTTCTTCTGGTCCAGAAAATGACGAAGGGCAAACATCTTGCACTGAGATAGTTGAGGAAAATGTTGCATTTGAGGTAAATATTGAAAAGCAATTACCTAATTCTGGAAGTCCCAGTAACTCAGATGCTGTTCTTCCTTCTGTTCCTCTTGGACAGTTAAGCGGTCAAAGTAGAAAAAGTTTGCGGCTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACGTGATTCCTTGTCAGTCTCAGAACAAGGCAAGGTTTCTTATGTTCCTATGGAATCAACGCAGGCAGGGTGGATGAGGTCTCGTTCGGCTAATGCCAAAGAAGGTAGTTCTAGACATCTGGATGAAGCTCCCACCACATCAGGAGAAAATGGAGGGATTGAGTCTGAATCAGTTAATCAAGAGCCTGTAACTGCATTTACTGTTGTGGAACAAAGACAGAATACCAGAAAGTCATTTCTTGGTACCAAAATTAAAAAAATGTACAGGAAGCAGAAATCTCTGCGTAAGAAGCTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTGGTGTTGATGAGAAAATATTAGAAGTCTCGGGACCCATTAGAAAATGCAAATCTGGAGTAGTTGATCATGATGCAGTTTTAAGAGCAATGGCTCGAGCTCTTGACAGAACTGAAGAGGCATACATAGAAATGGTGGAGAATAATCTAGAAAAAAATCCAGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAAGATCAAGATGTTTATGTGATGAACCTCGGAGATAGTCGTGTAATTTTGGCTCAAGAAAGGCCGAATGATCGTCATCCTAATTCAAGTTTTGTTAAGGATGATGTGAGGCATAGAAATCGATCTAGGGAGTCATTAGTACGGATGGAGCTGGATAGAATCTCAGAGGAGTCCCCAATTCACAATCAAAACAGTCATGTTCACAAGATGAACAAAAATAGGGAGATAGCGATTTGCAGATTAAAAATGAGAGCTGTTCAGCTTTCCACTGACCACAGCACAAGTGTTGAAGAGGAAATTTTCAGAATAAGGGCAGAACACCCTGATGATAATCAATCCATTTTTAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGGCATCTTTTAATGAAGTTCTACTGGAGAGGTTCCGAGTTGATTATGTGGGCACTGCTCCTTACCTAAGTTGCACTCCTTCTATTCTGCATCACCGACTTTCTTCTAGTGATCGGTTCTTGGTACTCTCGTCTGACGGACTTTACCAATACTTCAGCAATGAAGAGGTAGTTGCCCACATTACCTGGTTCATGGAAAATGTGCCTGAAGGTGATCCTGCACAATACCTGATTGCAGAGCTTCTCTTCCGTGCTGCTAAAAAGAATGGAATGGATTTTTATGAATTGCTTGACATTCCTCACGGAGATCGACGTAAATATCATGACGACGTTTCTGTTATGGTGGTTTCTCTGGAGGGAAGGATTTGGAGATCATCTGGATGA 2709 0.4308 MGNGTSRVVGCLVPFNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETFSGSFRHDGIEDPSGIHKPAKCFPETTFKTISGASVSANVSTARTGNQSALFASDILEPAASFEGTSSFAAIPLQPVPRGSGTSNGFMSGPLERGFASGPLDRGGGGFMSGPIEKGVMSGPLDSTDKSNFSAPLARGGHRPRLQQLMRSVSGPMKNTFSRTFSKHSSSSSWMQRLFFHPVTQLAWHSKDAKFRQEVSRNCVEVGPSEGEYKHSHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMNHLYKFVDKELEGLLWDYEVNSVDALQPEVPKTGNAAVAAEYSREELSVNHTSSNQDTLCCLEASSGPENDEGQTSCTEIVEENVAFEVNIEKQLPNSGSPSNSDAVLPSVPLGQLSGQSRKSLRLYELLQMESWNERDSLSVSEQGKVSYVPMESTQAGWMRSRSANAKEGSSRHLDEAPTTSGENGGIESESVNQEPVTAFTVVEQRQNTRKSFLGTKIKKMYRKQKSLRKKLFPWSYDWHREETGVDEKILEVSGPIRKCKSGVVDHDAVLRAMARALDRTEEAYIEMVENNLEKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNSSFVKDDVRHRNRSRESLVRMELDRISEESPIHNQNSHVHKMNKNREIAICRLKMRAVQLSTDHSTSVEEEIFRIRAEHPDDNQSIFNDRVKGQLKVTRAFGAGFLKRASFNEVLLERFRVDYVGTAPYLSCTPSILHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHITWFMENVPEGDPAQYLIAELLFRAAKKNGMDFYELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4193 902 MobiDBLite consensus disorder prediction 504 523 - -
Prci1g4193 902 MobiDBLite consensus disorder prediction 486 523 - -
Prci1g4193 902 CDD PP2Cc 595 893 IPR001932 -
Prci1g4193 902 MobiDBLite consensus disorder prediction 165 206 - -
Prci1g4193 902 PANTHER PROTEIN PHOSPHATASE 2C 280 892 IPR015655 GO:0004722|GO:0006470
Prci1g4193 902 MobiDBLite consensus disorder prediction 420 441 - -
Prci1g4193 902 Pfam Protein phosphatase 2C 717 863 IPR001932 -
Prci1g4193 902 SMART PP2C_4 278 891 IPR001932 -
Prci1g4193 902 ProSiteProfiles PPM-type phosphatase domain profile. 278 893 IPR001932 -
Prci1g4193 902 Gene3D - 252 423 IPR036457 -
Prci1g4193 902 SUPERFAMILY PP2C-like 290 894 IPR036457 -
Prci1g4193 902 Gene3D - 525 899 IPR036457 -
Prci1g4193 902 FunFam Protein phosphatase 2C 32 255 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4193 Prci-Chr1 56778948 56785840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4193 1 902 PP2C-type Phosphatase Gene Family AT2G46920 63.546 0.0 1117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4193 - - pcin:129315875 1802.72