Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4186 ATGGGGAGGCACTCTTGCTGCTACAAGCAAAAGCTTCGCAAGGGTCTCTGGTCCCCTGAAGAGGATGAGAAGCTCCTCAGGCATATCACTAAGTACGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCAAGCAGGCTTGCAGAGATGTGGAAAGAGCTGTAGGCTGAGGTGGATCAACTACTTGAGGCCTGATCTGAAGAGAGGCACATTCTCACAGGAAGAGGAAAACCTCATCATTGAGCTTCATGCAGTTTTAGGGAATAGATGGTCTCAAATTGCAGCGCAGCTTCCGGGGAGAACGGACAATGAAATAAAGAATCTGTGGAATTCATGCCTCAAGAAGAAGCTGAGGCAAAGAGGGATAGACCCTGTTACCCACAAACCACTGTCCGAGGTTGAAAATGGAGGTCAGGACAGAGATGGGGAGAAAGTTGCAGCACTTAGTTCCAATGAACTGAACCTGCTGAAATCAGAAAGCTCCAAGTCCGATGGAGCTTCCTATGAGCAGAAACCTTGTTCAAGTATTGCCCCTAAAGCCTATGCACATGACATGGAAGGTTCTTCTTCCACCTCCAAGATGAACACCAGAAGCAGCACTAGTTTCATCCCCGATTGTTCCAGTAAAGACCTGTTCCTGGACAGGTTCATCCCCAGTAGTCACCAGGAAAGCTACACCACTTCAGATTTGATGACGAATTTCCCCATTCACATGACCTATAACAATCCATCGACTGACCCTTCTCGTTGGTTCGCTCAAACTGGAGGAAGACCATTTGATATCAATACCGAATTTGCCTCCAGCGCCGCGTCCACTGTTTTTCCACTTTCAACCCCTTCATTTCTCCCTACTTCTGTTTGCTATAAGCCTTCTCTCCCAGTTCCATCAGATGATATTTCTACAGGTTCCTTCTCTGTGAATGAATCCCAGTACTGGGAAGCCGGTGCTTCCAACCACAGCAATAGAAACAGCCCTTTAAACTTGCAGAACAATATTGTTTCTTGGGGGTTGACAGATTGCGGCGGTACTGCTAAAGAGACTCATCAGATTAATATGATGGAGAGTCAGACAGAAGAAGCTAGGTGGGCTGAATATCTTCATAGTAACCCAATCTTAATGCTGGCTTCTGTACAGAATCAAGGTCCAGAATCCTTATGCAACGAAGTAAAGCCGGCCTCGCATTTGGTACCCGATGCTTTAGGAGCTATTTTGCCTCGCCACAAGCAGCAAGATCATCAATCCTTTCAAACTTCTACTATATTCTCAAAGGACATCCAGAAGCTCACTGCAGCTTTCGGACATATATAG 1305 0.4667 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEVENGGQDRDGEKVAALSSNELNLLKSESSKSDGASYEQKPCSSIAPKAYAHDMEGSSSTSKMNTRSSTSFIPDCSSKDLFLDRFIPSSHQESYTTSDLMTNFPIHMTYNNPSTDPSRWFAQTGGRPFDINTEFASSAASTVFPLSTPSFLPTSVCYKPSLPVPSDDISTGSFSVNESQYWEAGASNHSNRNSPLNLQNNIVSWGLTDCGGTAKETHQINMMESQTEEARWAEYLHSNPILMLASVQNQGPESLCNEVKPASHLVPDALGAILPRHKQQDHQSFQTSTIFSKDIQKLTAAFGHI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4186 434 MobiDBLite consensus disorder prediction 122 141 - -
Prci1g4186 434 PANTHER MYB DOMAIN PROTEIN 55 1 345 - -
Prci1g4186 434 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci1g4186 434 SMART sant 13 63 IPR001005 -
Prci1g4186 434 SMART sant 66 114 IPR001005 -
Prci1g4186 434 FunFam Myb transcription factor 11 67 - -
Prci1g4186 434 Gene3D - 11 67 - -
Prci1g4186 434 CDD SANT 17 61 IPR001005 -
Prci1g4186 434 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci1g4186 434 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci1g4186 434 Gene3D - 69 135 - -
Prci1g4186 434 FunFam MYB transcription factor 68 140 - -
Prci1g4186 434 CDD SANT 69 109 IPR001005 -
Prci1g4186 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci1g4186 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci1g4186 434 MobiDBLite consensus disorder prediction 122 140 - -
Prci1g4186 434 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Prci1g4186 434 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4186 Prci-Chr1 56729890 56731925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4186 1 139 MYB Transcription Factor Family AT4G01680 92.086 1.25e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1g4186 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4186 K09422 - gmx:100782199 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4186 1 56729890 56731925 Prci3g3633 3 45746344 45748188 CCT