LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g4181	ATGGAAAACCAACAACACCGCCGTGAATTGACCTCCACTAGCTCGGGCTTCTTCCTCCGTCAGAACTTGGATCCAACAGACAATCACGACTCCAGCCATCGTCTTAACATCAAAGAAATGGATTTCTTCTCTTCCGTTTCACTCGGTAAATCTTTTGAGACTAGAAATCACCACGCCCTAGATCCTCATGACAGGACGATCAATCACTATGGATCATCAAGTGCTCCCTCATCGGATCGCCCGGTCAACACTGGACTGAATTTGAACTGTGCAAGTCATGGAATGCCGAGATTGGAAAACGAAGAGAAGATCGACGCTGAATCAAAATTAATCCAAAGGGAATTGCGGAGACTGCATGAAGAGAATCAGAAGTTGAAGAACATGCTGGAACAGATCACGAAAGGCTATAACCAACTGCAGGCACATCTGTTAATCGCTCTGCATACACAAAAGGTGCAGAACGTTGAAGCAAATGGGATGTTGTCGGGGCAACAGGCATTGGACCCACGGCAGTCCACCAAATTAGACATGAACAATTCGGTTTCAGACGATATGACTCAGCAAGAGCTTTCAGTCTCTCCTTCATCCAACAATGCGGAGTTAATGTCAAAGCAACGAGACCACCACTACCACCACCAATCACCTAAACTTCCTGGAAAGCAAGCAACTTGTCCTGAAAATAATTCCAAGTCACAAGATTCCAAGAGCGAAGAACAAAAGCCAGATATTCATTTCAGAAAAGCCAGGGTTTCCGTGCGTGCAAGATCAGAAGCCCTCATGATTAGCGATGGATGTCAATGGAGGAAATACGGTCAAAAAATGGCCAAGGGTAACCCTTGTCCACGCTCCTACTATCGCTGCACCATGTCCGTTGGATGCCCAGTTCGTAAGCAGGTGCAAAGATGTGCCGAGGACAAGACGGTGCTGATAACAACATACGAAGGGAGTCACAGCCACCCTCTCCCACCGGCCGCCACTGCCATGGCAAACACGACATCTGCAGCGGCGGCGATGCTTCTATCAGGTTCAACGACGAACAACGAAGCCTTGACAAATTCAGCCGGAGGGTACTTGTCCTCTATGCCCTACTCTTCAATGGCAACCCTATCAGCCTCTGCACCGTTTCCTACGATCACTCTGGACTTGACTCAGACCCCAAAAAGCGCGCAGCTTCACCGGATGCCGTCCACTGGCATGACGTTTCCTCTGGCATTGCAGGGTTATCCTCTGCAGCAAATAGGGAAGTCAGTGCTGTCCCCTCAGAAGCTACCGGAGGTGCCTTCTTGTATGGTGGAGACGGTGGGTGCAGCTATTGCCTCTGATCCGAACTTCACGGCAGCGCTGGCGGCAGCCATTTCGTCAATGTTTGGGAGTAATTTGAATGGCGATGGAGGGAGTGGAAATGGAATTACCATTCCTCACCTTAACGACGGGATTTCTGTGTCGCCTCAGCTTCCTCCGTCCTGCACTACATTCTCCACCAACTAG	1488	0.4953	MENQQHRRELTSTSSGFFLRQNLDPTDNHDSSHRLNIKEMDFFSSVSLGKSFETRNHHALDPHDRTINHYGSSSAPSSDRPVNTGLNLNCASHGMPRLENEEKIDAESKLIQRELRRLHEENQKLKNMLEQITKGYNQLQAHLLIALHTQKVQNVEANGMLSGQQALDPRQSTKLDMNNSVSDDMTQQELSVSPSSNNAELMSKQRDHHYHHQSPKLPGKQATCPENNSKSQDSKSEEQKPDIHFRKARVSVRARSEALMISDGCQWRKYGQKMAKGNPCPRSYYRCTMSVGCPVRKQVQRCAEDKTVLITTYEGSHSHPLPPAATAMANTTSAAAAMLLSGSTTNNEALTNSAGGYLSSMPYSSMATLSASAPFPTITLDLTQTPKSAQLHRMPSTGMTFPLALQGYPLQQIGKSVLSPQKLPEVPSCMVETVGAAIASDPNFTAALAAAISSMFGSNLNGDGGSGNGITIPHLNDGISVSPQLPPSCTTFSTN	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g4181	495	FunFam	probable WRKY transcription factor 31	246	323	-	-
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	60	83	-	-
	Prci1g4181	495	Coils	Coil	108	142	-	-
	Prci1g4181	495	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	99	459	IPR044810	GO:0003700
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	164	201	-	-
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	1	32	-	-
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	231	249	-	-
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	8	25	-	-
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	67	83	-	-
	Prci1g4181	495	MobiDBLite	consensus disorder prediction	164	249	-	-
	Prci1g4181	495	ProSiteProfiles	WRKY domain profile.	256	322	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci1g4181	495	SUPERFAMILY	WRKY DNA-binding domain	254	322	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Prci1g4181	495	Gene3D	WRKY domain	246	323	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Prci1g4181	495	SMART	WRKY_cls	261	321	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci1g4181	495	Pfam	WRKY DNA -binding domain	263	320	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g4181	Prci-Chr1	56674564	56677710	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g4181	2	495	WRKY Transcription Factor Family	AT4G01720	42.642	7.29e-91	284

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Prci1g4181		WRKY	3.1e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g4181	-		-	pcin:129287022	941.414