Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4162 ATGGGGACCGAGAATGGCCAAGACGAAGCAAGCACATCAAAGAATGAAGCAGGAACAAGCACAAACGAAGAAAATAGCAATCAAACAGAAAAGGCCGAGACAGTTCCATTTCACAAGTTGTTCACATTTGCCGACTCTACGGATATATTGTTGATGGTCGCTGGCACCGTTGGGGCCGTTGGAAATGGTGTCGGTTTGCCTCTCATGACGTTGCTGTTCGGCGAGATGATCGACTCCTTCGGAAGTAACCAGAACAGCCCTGAAATGGTCGATAGAATTTCCAAGGTTGCTCTGAAGCTTGTGTACTTGGCAGTAGGAACTGGGGTGGCAGCTTTTCTCCAGGTGGCTTGCTGGATGGTCACAGGAGAGAGACAGGCCGCGAGAATAAGGGGTTTGTATTTGAAAACAATACTAAGACAAGATGTGGCTTTCTTCGACAAGGAAACAAACACTGGAGAGGTGGTGGGTAGAATGTCAGGTGACACTGTTCTCATACAAGACGCCATGGGTGAAAAGGTTGGAAAATTTCTGCAGCTAATATCAACATTTTTTGGCGGTTTCGTAGTAGCATTTGTGAAAGGGTGGCTTCTCAGTCTTGTCATGTTATCCACTCTTCCACTCCTTGTGGTGTCTGGTGCGGCTATGGCCTTCATTATAGGTAGGATGGCATCACAAGGCCAAACGGCTTATGGAAAAGCTGCAAATATCGTTGAACAGACAATTGGTGCAATTAGAACGGTTGCATCTTTCACGGGAGAGAAGCATGCAGTATCCGGTTACGGCAGGTTTCTTGTAGATGCATACAGAGCAGGAGTTCGTGAAGGTATGGTAGCAGGAATGGGTCTTGGGTCAGTTATGTTCGTAATTTTCTGTGGCTATGCTTTGGCCACATGGTATGGGGGAAAGTTGATACTGGATAAAGGATATAACGGGGGTATAGTGATCACTGTGATCTTTGCCGTCTTAACTGCTTCCATGAATCTTGGTCAAGCAGCCCCTTGTATGAGTGCTTTCGCGGCAGGTCAAGCTGCAGCTTATAAAATGTTCAAGACTATTGAGAGAAAGCCAGATATAGATTCTTATGATGAAAAAGGGAAAACATTGGAAGATATTCAAGGGGAAATAGAGTTGAGGGAAGTTTATTTCAGTTACCCAGCAAGACCTGGGGAGCTGATTTTTGATGGGTTCTCTCTTAAAATACCAAGTGGAACTACTACAGCTTTGGTTGGGCAAAGTGGAAGTGGAAAGTCCACTGTCATCAGTTTAATAGAAAGATTTTACGATCCACAGGCAGGTGAAGTTCTTATAGATGGCTTGAACTTGAAAGAATTACAACTCAGATGGATTAGAGGAAAAATAGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCTTCTAGCATTAAGGATAACATTGCTTATGGAAAGGAGGGAGCAACAAATGAAGAGATAAAAGCTGCAGCTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCACAGGGATTGGACACGATGGTTGGTGAACATGGGACTCAGTTGTCTGGGGGGCAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTTAAAAATCCAAAAATTCTACTCCTAGATGAAGCTACGAGTGCACTTGATGCAGGGTCTGAAAGGATTGTGCAAGAGGCTCTAGACAGGATCATGGTAAATAGAACTACTGTTGTTGTGGCACATCGCTTAAGCACAGTAAGAAATGCTGATATGATTGCTGTGATTCACAGAGGAAAGATGGTCGAGAAAGGAACACACGCAGAATTACTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCTTACAGGAAGTAAACAAGGAGTCAGAAGATAGTGCAGATCATGAAAACAAACGCGAACTTTCCTCAGAGTCCTTAAGGCATTCTAGTCAAATAAGGTCATTAGGAAGATCCATAAGTCGAGGATCATCTGTGGGAAATAGCAGCCGCCACTCATTTACGTTTGGCTTGCCTACAGCAGTCAACATGACTGATCCTGAACTTGAAAATCAGAAAACTAAAGAACAATCGCCAAAGGTTCCTCTCCGCCGCCTTGCTTACCTGAACAAGCCAGAGATTCCAGTGCTTCTGATTGGATCCGTAGCTGCCATCGTGAATGGTGCCATACTTCCTATATTTGGTATTTTGATTTCCAGTGCAATCAAATCATTCTACGAGCCACCTGATGATATGAAAAAGGATTCCAAGTTCTGGGCATTAATGTTCATGGTACTTGGTATTGCATCTTTGTTGGCAATTCCTGCTCGAGGTTACCTTTTTGCCATTGCCGGATGCAAGTTAATCCAACGCATCAGGCTGATGTGCTTTGAGAAGGTAGTAAACATGGAGATAGGCTGGTTTGATGATCCTGAGCATTCAAGTGGTGTAATTGGAGCAAGACTCTCAGCAGATGCAGCATCTGTGCGTGCACTTGTTGGGGATGCTCTCGGACAACTGGTCGAGAATCTCGCATCATTATTGGCGGGTTTGATAATTGCTTTCATTGCAAGTTGGCAGTTAGCTTTTATTATTCTCGTGTTGATTCCCTTGATTGGAGTAAACGGATATGTGCAAGTGAAATTCATGAAAGGGTTCAGCGCAGATGCAAAGCAAATGTACGAGGAAGCAAGTCAAGTTGCTAACGATGCAGTTGGAAGTATAAGAACAGTAGCTTCATTTTGTGCTGAAGAAAAGGTGATGGAGCTATACAGGAAGAAATGTGAAGGGCCTATGAAATCAGGGATTCATCAAGGCTTGATCAGTGGAACAGGATTTGGGTTATCGTTTTTCCTACTCTTCGCTGTCTATGCAACCAGCTTTTATGCGGGAGCTAAACTTGTGGAGGACGGCAAAGCGACATTCCCAGATGTTTTTCGGGTTTTCTTTGCTTTAACTATGGCAGCTCTGGCAATTTCACAATCAAGCTCTTTTGCGCCTGATTCTAGCAAAGCCAAGTCAGCTGCTGCTTCTATATTTGGAATAATTGATAGGAAATCTGTGATAGATCCAAGCGATGAGTCAGGAGCCACGTTGGATAGCGTGAAGGGAGAAATTGAGCTTCGTCATGTTAGCTTCAAGTATCCATCCAGGCCAGACATACAAATTTTCCGAGACCTTAGCTTGGCCATACATTCTGGAAAGACGGTAGCCCTTGTAGGTGAAAGTGGAAGCGGAAAATCTACCGTGATCTCATTATTGCAAAGATTTTACGATCCCGATTCAGGTTCAATTACACTTGATGGAATAGAGATTCAGAAGTTACAACTTAAATGGTTAAGGCAGCAGATGGGTCTTGTGGGCCAAGAGCCAATATTGTTCAATGACACTATTCGTGCCAATATTGCCTATGGAAAGGGAGGCAATGCAACTGAAGGAGAAATCATAGCTGCAGCCGAACTGGCCAATGCTCATAAGTTCATTAGCGGCTTGCAACAAGGGTACGATACGGTTGTAGGAGAAAGGGGAATTCAATTATCAGGTGGGCAAAAGCAAAGAGTAGCAATTGCACGTGCTATAATTAAAGGCCCAAAGATTTTGTTATTCGATGAAGCAACAAGTGCACTGGACGCTGAGTCAGAGAGGGTAGTTCAAGATGCATTGGATAGAGTGATGTTGAATAGAACTACCGTGGTTGTGGCCCATCGTTTATCTACAATAAAACATGCAGATGTTATTGCAGTGGTTAAAAACGGAGTCATAGTTGAGAAAGGGAGGCATGAGACCTTGATTAATCAAGGGTGGATTTTATGCTTCTTTAGTCCAACTTCATGCCAGCGCTTCTACAGCATGAGTTTCTTGTGA 3831 0.4385 MGTENGQDEASTSKNEAGTSTNEENSNQTEKAETVPFHKLFTFADSTDILLMVAGTVGAVGNGVGLPLMTLLFGEMIDSFGSNQNSPEMVDRISKVALKLVYLAVGTGVAAFLQVACWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFFGGFVVAFVKGWLLSLVMLSTLPLLVVSGAAMAFIIGRMASQGQTAYGKAANIVEQTIGAIRTVASFTGEKHAVSGYGRFLVDAYRAGVREGMVAGMGLGSVMFVIFCGYALATWYGGKLILDKGYNGGIVITVIFAVLTASMNLGQAAPCMSAFAAGQAAAYKMFKTIERKPDIDSYDEKGKTLEDIQGEIELREVYFSYPARPGELIFDGFSLKIPSGTTTALVGQSGSGKSTVISLIERFYDPQAGEVLIDGLNLKELQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATNEEIKAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAGSERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHAELLKDPEGAYSQLIRLQEVNKESEDSADHENKRELSSESLRHSSQIRSLGRSISRGSSVGNSSRHSFTFGLPTAVNMTDPELENQKTKEQSPKVPLRRLAYLNKPEIPVLLIGSVAAIVNGAILPIFGILISSAIKSFYEPPDDMKKDSKFWALMFMVLGIASLLAIPARGYLFAIAGCKLIQRIRLMCFEKVVNMEIGWFDDPEHSSGVIGARLSADAASVRALVGDALGQLVENLASLLAGLIIAFIASWQLAFIILVLIPLIGVNGYVQVKFMKGFSADAKQMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMKSGIHQGLISGTGFGLSFFLLFAVYATSFYAGAKLVEDGKATFPDVFRVFFALTMAALAISQSSSFAPDSSKAKSAAASIFGIIDRKSVIDPSDESGATLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKLQLKWLRQQMGLVGQEPILFNDTIRANIAYGKGGNATEGEIIAAAELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKGPKILLFDEATSALDAESERVVQDALDRVMLNRTTVVVAHRLSTIKHADVIAVVKNGVIVEKGRHETLINQGWILCFFSPTSCQRFYSMSFL 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4162 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 613 IPR027417 -
Prci1g4162 1276 Gene3D - 373 626 IPR027417 -
Prci1g4162 1276 FunFam ABC transporter B family member 1 1018 1261 - -
Prci1g4162 1276 PANTHER ABC TRANSPORTER B FAMILY 16 615 IPR039421 -
Prci1g4162 1276 SMART AAA_5 402 588 IPR003593 GO:0016887
Prci1g4162 1276 SMART AAA_5 1055 1248 IPR003593 GO:0016887
Prci1g4162 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1019 1256 IPR027417 -
Prci1g4162 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1028 1265 IPR003439 GO:0005524
Prci1g4162 1276 CDD ABC_6TM_Pgp_ABCB1_D2_like 696 1011 - -
Prci1g4162 1276 CDD ABC_MTABC3_MDL1_MDL2 375 613 - -
Prci1g4162 1276 MobiDBLite consensus disorder prediction 616 636 - -
Prci1g4162 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 707 993 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g4162 1276 ProSitePatterns ABC transporters family signature. 514 528 IPR017871 GO:0005524|GO:0016887
Prci1g4162 1276 FunFam ABC transporter B family member 9 995 1017 - -
Prci1g4162 1276 Gene3D ABC transporter type 1, transmembrane domain 98 1002 IPR036640 GO:0005524|GO:0016020
Prci1g4162 1276 FunFam ABC transporter B family member 9 39 372 - -
Prci1g4162 1276 MobiDBLite consensus disorder prediction 637 659 - -
Prci1g4162 1276 Gene3D - 1018 1259 IPR027417 -
Prci1g4162 1276 Pfam ABC transporter 1047 1196 IPR003439 GO:0005524
Prci1g4162 1276 SUPERFAMILY ABC transporter transmembrane region 38 357 IPR036640 GO:0005524|GO:0016020
Prci1g4162 1276 FunFam ABC transporter B family member 1 365 614 - -
Prci1g4162 1276 Pfam ABC transporter transmembrane region 706 978 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g4162 1276 Pfam ABC transporter transmembrane region 53 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g4162 1276 ProSitePatterns ABC transporters family signature. 1168 1182 IPR017871 GO:0005524|GO:0016887
Prci1g4162 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 53 340 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g4162 1276 MobiDBLite consensus disorder prediction 1 31 - -
Prci1g4162 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 375 611 IPR003439 GO:0005524
Prci1g4162 1276 FunFam ABC transporter B family member 1 686 994 - -
Prci1g4162 1276 CDD ABC_MTABC3_MDL1_MDL2 1028 1256 - -
Prci1g4162 1276 CDD ABC_6TM_Pgp_ABCB1_D1_like 52 336 - -
Prci1g4162 1276 MobiDBLite consensus disorder prediction 616 659 - -
Prci1g4162 1276 Pfam ABC transporter 394 542 IPR003439 GO:0005524
Prci1g4162 1276 SUPERFAMILY ABC transporter transmembrane region 688 1012 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4162 Prci-Chr1 56595378 56601533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4162 16 613 Calmodulin-binding Proteins AT2G36910 37.271 9.80e-112 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4162 K05658 - gmx:100800034 1979.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4162 1 56595378 56601533 Prci3g3620 3 45646227 45652915 CCT