Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4161 ATGGCTCTCCATGTGACCATAACCACACGTGACTTTGTGAAACCAGCAGAGCAGGCACCATCAACCATACTAGACCTATCAGTCATCAATAGATTACCGGTTCTAAGGTGCAATGCTCGAACCTTGCATGTATTCAGACATGGCCCTGAAGCGTCCACCGTCATTAAAGATGCCTTGTCCAAAGCTTTAGTTCCGTACTACCCTCTTGTAGGAAGGCTCTCTCAGCCTTCACATGGTCCCCTTCGCATTGAATGCTCAGGCGAAAGAGTGTGGTTCATTAAGGCATCGGCCCCTTGTACCCTTGCTTCTGTCAATTACTTCGATGACGTTCAATCTATCCCGTATAATGATCTTTTTCATCCTATCCCTGACACTGAGATTGAAGGCATCGACCCCCTCATCAAAATACAGGTGACACAATTTGGTTGCGGGGGATTTGTGATAGGCCTAATATTCTGCCATAGCGTATGTGATGGCCTTGAAAAACCAAGCATAACTCTAGTATGGCACAAGGACTTCTTTCCACTTACACCTAACGAAGAAATTGTGGCTGCATTGCCAAAAATGCCATCTGGTCCACCACCAATTCTACAGTATAGGCTAGAACATGATAATTTAGACATACCCACAGATCACGTTCACCGACTTAAGTGAGAGTTTCAGGAAGTAACTGGAGAGAATTATTCTGCCTTTGAGGTTGTAGTCGCAGGGCTTTGGATCAGTCGAACTAGAGCTATAAACTTGGATCCAAAGACCCTTGTGAAATTAATCTTCTTTGCCAATTGCCGTCAGCTCTTGAAGCCACCTCTGCCTCAAGGCTTCTATGGGAATTGCTTCTTCCCTGTGACAATTACTATTCCATTTGAGTCGCTTACATGGACATCGATTATCGGAGCAATTAAGATGATTTAAGAAGCCAAGGCTAGGCTTCCTGTGGAGTTTGGTAAATACTTGAAGAGTGAGCATTTGAAAGACGGGGAAGACCCATTTGCTCCTCCACTGACATACACAACTCTATTCATATTAGAGTGGGGATGGCTGGGATTCAACTAGGTGGACTACCAGTGGGGGCCACCAATCCATGTGGTTCCCTTACAAGGCTCCAGTGTCATACCAGTTGGCATTATAGGGTCCCTGCCCCTGCCAAGGAAAGGGATTTGGTTGATAACTTGGTGCGTGGAGGAGGTGCATCGTGGTCCCTTCCTTGATCACGTGGCCTAA 1221 0.4611 MALHVTITTRDFVKPAEQAPSTILDLSVINRLPVLRCNARTLHVFRHGPEASTVIKDALSKALVPYYPLVGRLSQPSHGPLRIECSGERVWFIKASAPCTLASVNYFDDVQSIPYNDLFPXPIPDTEIEGIDPLIKIQVTQFGCGGFVIGLIFCHSVCDGLEKPSITLVWHKDFFPLTPNEEIVAALPKMPSGPPPILQYRLEHDNLDIPTDHVHRLKXEFQEVTGENYSAFEVVVAGLWISRTRAINLDPKTLVKLIFFANCRQLLKPPLPQGFYGNCFFPVTITIPFESLTWTSIIGAIKMIXEAKARLPVEFGKYLKSEHLKDGEDPFAPPLTYTTLFILEWGWLGFNXVDYQWGPPIHVVPLQGSSVIPVGIIGSLPLPRKGIWLITWCVEEVHRGPFLDHVA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4161 407 Pfam Transferase family 211 365 - -
Prci1g4161 407 Pfam Transferase family 3 161 - -
Prci1g4161 407 Gene3D - 194 402 IPR023213 -
Prci1g4161 407 Gene3D - 1 166 IPR023213 -
Prci1g4161 407 PANTHER ACYL TRANSFERASE 4 3 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4161 Prci-Chr1 56578913 56580232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4161 3 372 Monolignol Biosynthesis Gene Families AT5G48930 25.917 2.21e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4161 - - qsa:O6P43_010923 564.303