Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4160 ATGGAAGATGAATCTTTTCTTTCATGGCAAACAAGGACCCAATTTGAACCCATCATCGAGCATCGAGTTTCTGATTTATCCTTCCCCAGCTCTCGTTCCTTCAACGAATTTATCACTTTACAGGAAGCCCCGCGAGACCCACAACCCTCATCTCAATTATTGACTCCGAATGCTCCCAAGAAGAAACTTACTCGCTGCAAGACTGCTCCTGCCATGGTTGTTTTGCAAGACCTCAGACACAAAACGCCCGATGTTCCCAAACCACAGTCTAGCTCCATCATCAGGCAAGGCATTTGCTTACTCATGATATATCTTTCGATTGGGGTTGTCATATACTCCTTCAATCGGGACCATTTTTCCGGCGTAGAGACTCACCCTGTAGTTGATGCACTTTACTTTTGTATAGTCACCATGTGCACAATCGGTTACGGGGATATTACACCGACAAGCCCAGTAACTAAGGTCTTTGCATGTGTCTTTGTATTGGTAGGGTTTGGATTCATTGACATATTGCTTAGCGGGCTTGTTAATTACGTCCTAGATTTGCAAGAGAATACGATTCTAACTGGGCTTGTAATGGGGGCTCAAAGATCTCAAGAAGGATTCTCTGCAAGAAATTACATAGTTGATGTGGCAAAGGGGCGGATGAGAATCAGATTGAAGGTTGGTTTGGCATTGGGTGTGGTGGTGCTGTGTATTGGAATAGGGAGTCTGGTTTTGTACTTTGTGGAGGATTTGAATTGGATTGATTCAATTTACTTATCGGTTATGTCTGTAACAACAGTAGGGTATGGGGATAGAGCCTTCAAGACCCTCCCTGGGAGGCTCTTTGCTGCCATTTGGCTCCTTGTTTCCACACTCATGGTGGCCCGGGCCTTCCTGTATTTGGCAGAGGCCAGAATTGATAGAAGGCACCGGAGAATAGCTAAGTCGGTGTTGCATAGAGACATGACTGTTGAAGATTTGCTGGCTGCTGCTATCAATAACACCGGTTTCATCAGTAAGTCAGAGTATGTAGTATTCAAGCTCAAAGAGATGGGGAAGATAGGGGAAAAAGATATATTGCAAATCTGTGACCAATTCAGCAAGCTTGATTCCACTAACTCTGGGAAGATAACGCTACCTCATCTCTTGGAGGGCCGGTCATGA 1149 0.4491 MEDESFLSWQTRTQFEPIIEHRVSDLSFPSSRSFNEFITLQEAPRDPQPSSQLLTPNAPKKKLTRCKTAPAMVVLQDLRHKTPDVPKPQSSSIIRQGICLLMIYLSIGVVIYSFNRDHFSGVETHPVVDALYFCIVTMCTIGYGDITPTSPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQENTILTGLVMGAQRSQEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEDLNWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDRRHRRIAKSVLHRDMTVEDLLAAAINNTGFISKSEYVVFKLKEMGKIGEKDILQICDQFSKLDSTNSGKITLPHLLEGRS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4160 382 FunFam Two-pore potassium channel 3 205 319 - -
Prci1g4160 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 127 355 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci1g4160 382 Gene3D - 205 325 - -
Prci1g4160 382 Gene3D - 72 191 - -
Prci1g4160 382 SUPERFAMILY Voltage-gated potassium channels 75 183 - -
Prci1g4160 382 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci1g4160 382 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci1g4160 382 FunFam Two-pore potassium channel 5 82 192 - -
Prci1g4160 382 Pfam Ion channel 101 179 IPR013099 -
Prci1g4160 382 Pfam Ion channel 230 298 IPR013099 -
Prci1g4160 382 SUPERFAMILY Voltage-gated potassium channels 213 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4160 Prci-Chr1 56566941 56569189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4160 41 378 Ion Channels AT4G01840 66.181 8.48e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4160 K05389 - gmx:100801488 543.502