Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4156 ATGGCTGGAGACGTGAACCGAAACGACTACAATGTCATCGCTTGTGCGCCGGGGGCGGCCGGTAGCGCAAGAGCGGAGCCGCAATACGTCTCAGCAAAGATCTCTGTGTGGTGGGACATTGATAACTGCCAAGTTCCCAAGGGCCGCGACCCTCACGCCATTGCTCAGAATATTAGTTCCGCACTCGTGAAGATGAACTATTGCGGTCCCGTCTCCATCTCCGCCTACGGCGACACAAGTCGGATTCCATCTTTCCTTCAGAAAGCACTTTCTAGCACCGGAATTTCCCTCAACCACATCCCAGCCGGTGTGAAAGATGCCAGTGACAAGAAAATTCTAGTTGATATGTTGTTATGGGCAGTAGATAACGCAGCTCCTGCAAATTATTTGCTGATTTCTGGAGATAGGGATTTCTCAAATGCTCTGCATCAGTTGCGCCTGAGAAAATACAACATTCTTCTAGCACAACCACCAAAAGCATCAGCTCCTCTAGTCGCAGCAGCAAAATGTGTATGGCTCTGGACGAGCCTTTTAGCTGGTGGGGCCCCACTATCAAGTGGCGAATCATCATGCCCTGCAAGTGGTAACCATGTCTCTAATTCTGAGAGGATTCAAAGCCTAGTTGCTGAGCCAAATCAAATAAATCGGCCACTGGTTCTCAGTTCCGAAAGCCTTGATATGGGCAGTCAAAATACCTATACTGCTAGAAGCATTGGTCATTTGAAACACAAAGTAAAACATGTTTCGAAAAATGACAATCAGTCTAACCTATCAAGCTCTTCAAGCTTACTTGTCACTGGTTCAGAAGGTAAGAACAATGATCATCCTAGACAAGTGCAATCACCAGTGAAGCTGTTCCGAAAAGCTCCGCATGAATTCTTCTTTAGTAGTGTGCCCGTAGTCCCAAACAGTAGGTCTACTCCTAACCTTCCAAGCAACCAAGATTGCTTAGAAAATAAAATGGGCAACTCTAGTGAAATTCCTCGGGATCTCTATCATAGTTCTTTGCGGTCAACCAACCTTCATATACAGCCCATGTCTGGACTGAGTTTTCCTCTTCCTGATTCTCATACTCGAATTCAACCAGTTCCTCCCCATTCAGATGTATCCAAATTGTCTGCAATCCCAAATTCATTTTATGACATACCTAAGGTACCTAATTCTCCACATCCTAGCAATGTCAAAAGTACTCCTATTTGTCATCAGCGAACCAGAGAAGATTCTAATCCAAGTACTGCTCAATCTCCTAATCTACATAGCTTCGATGTACACCTTGCTGGTCATGACCCATCACGTGGCCAAGTATTTCATTATGAGAACTTGAACCAGAGGCATCCCCGTGGTTCTGAACGTTTGCTTTCTCCTTCCTTCACTGGAATTGCCAATACCAGTTCGAACAATGTTATCTTGGAAGTTCAGGGATGTCCACCACCTTCTGAGTATGAGCAAGGCCTCATTGGGGTTGTTCTTCTAGCCTTAAATACTCTGAAGGTTGAAAAGGTTATGCCAACTGAAGCAAATATAACTGATTGCATTTCTTATGGAGATTCCAAATATCGAACTACTGATGTCAAGAAGGCCTTAGATTGTGCAGTCAAGCTAAATGTGGTAATAAAACGAAGACTGGGTGCTTTGCACTTTTATGTTACTAGAAACGAGAAACTTTGGAATTGTATAAACCTTAAAGGTGAAAATGTTAGTCAGTACCCAAAAACAACATGGGATCGAATACAAGATTTCCTTGCTTCATCATCTGGGCGCTCAGCAATTTTGTCTTCCCAGTGCAGATATGAAGCATCTTTAATTCTAAGGAAAGAATGCCTTAAGGAGCTTATGTTAGGAGAGGTACTTCAGATCTTGAATATGATAATCACGGTCAAGAAATGGATAATAATTCCTCAGTCTGGATGGCAGCCGATTACTATTATGCTTAAAGAGAGTGGAGGGTGA 1950 0.4364 MAGDVNRNDYNVIACAPGAAGSARAEPQYVSAKISVWWDIDNCQVPKGRDPHAIAQNISSALVKMNYCGPVSISAYGDTSRIPSFLQKALSSTGISLNHIPAGVKDASDKKILVDMLLWAVDNAAPANYLLISGDRDFSNALHQLRLRKYNILLAQPPKASAPLVAAAKCVWLWTSLLAGGAPLSSGESSCPASGNHVSNSERIQSLVAEPNQINRPLVLSSESLDMGSQNTYTARSIGHLKHKVKHVSKNDNQSNLSSSSSLLVTGSEGKNNDHPRQVQSPVKLFRKAPHEFFFSSVPVVPNSRSTPNLPSNQDCLENKMGNSSEIPRDLYHSSLRSTNLHIQPMSGLSFPLPDSHTRIQPVPPHSDVSKLSAIPNSFYDIPKVPNSPHPSNVKSTPICHQRTREDSNPSTAQSPNLHSFDVHLAGHDPSRGQVFHYENLNQRHPRGSERLLSPSFTGIANTSSNNVILEVQGCPPPSEYEQGLIGVVLLALNTLKVEKVMPTEANITDCISYGDSKYRTTDVKKALDCAVKLNVVIKRRLGALHFYVTRNEKLWNCINLKGENVSQYPKTTWDRIQDFLASSSGRSAILSSQCRYEASLILRKECLKELMLGEVLQILNMIITVKKWIIIPQSGWQPITIMLKESGG 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4156 649 Gene3D - 29 176 - -
Prci1g4156 649 Pfam OST-HTH Associated domain 592 646 IPR025677 -
Prci1g4156 649 MobiDBLite consensus disorder prediction 251 279 - -
Prci1g4156 649 MobiDBLite consensus disorder prediction 244 279 - -
Prci1g4156 649 MobiDBLite consensus disorder prediction 384 418 - -
Prci1g4156 649 PANTHER LIMKAIN B LKAP 24 528 IPR024768 GO:0005777|GO:0010468
Prci1g4156 649 MobiDBLite consensus disorder prediction 389 418 - -
Prci1g4156 649 CDD PIN_limkain_b1_N_like 33 157 - -
Prci1g4156 649 Pfam NYN domain 33 168 IPR021139 GO:0004540
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4156 25 232 C2H2 Transcription Factor Family AT5G61190 66.667 2.11e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4156 - - pcin:129310578 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4156 1 56530525 56533572 Prci1g4156 1 56530525 56533572 ECH