Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4152 ATGGACGACTGCTGTGCGGTCTGCGCCGAACCTTTGGAATGGGTTGCGTACGGTCCCTGTTTGCACCGGGACGTTTGCTCGACCTGCGTTGCTCGTCTCCGTTTCATATGCGACGATCGTCGTTGTTGCATCTGCAAGACCCAGTGTGACCGTGTTTTTGTCACGAAGGCTCTAGGAGATTTTACAAGGATGATTAATGACTTCTCAGTGCTGCCATCTGATGTAAGGGAGGGTCAGGTGGGTTCATACTGGTACCATGAAGATACAAATGCTTTTTTTGATGATGCGGACCACTACAAGATGATCAAGGCTATGTGCAAGCTTTCATGTAGTGTATGTGACAAGATGGAGGAGCAAGCACATGATGCCTCAAAGCGTCGAGCAAGGTTTAGGAATATAGAACAGCTAAAGGGTCACTTGTACCGATTTCACAGGTTGCTCATGTGCAGTTTATGTTTGGAAGGAAGGAAGGTATTCATTTGTGAACAAAAGCTATATACTAGAGCACAGTTAAATCAGCATATAAACACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCCGATCCCCATTTTATGGGGACAATGAACTATACACTCATATGTCAACAGAACATTTTACTTGTCATATATGCCAAAGGCAACATCCAGGACACTATGAATATTATAAGAATTATGATGACTTAGAGACCCACTTCCGTCAAGAGCACTTCTTATGTGAAGACGAAGGTTGCCTTGCTAAGAAGTTCATTGTATTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATTGAACATGGAGGGCGAATGTCAAGGTCAAAACGCAATGCTGCACTTCAGATTCCAACTAGTTTCCGATACAGACACAGTAATCAACAAGATCAACGGCGTGGAAGAGGCCGGACATTTCGTCGTGATCTTTCTGAAAGTGAACTTTCTATGACCATTCAAGCCAGTTTTGACACAGCTAGTGTAGAGTACACAAGTCATGATCCAGCTACATCAAGCAGTGGACAAGATGCTCTTGGTTATGGGAACTTTGATAATGAGCCAGCCTTCCAATCATCTGAATCCTTAGCTACATCAAGTTCTGAGTCATCTTCAAGATACCTCCAAGCCTTGGGGCAAAATTCAAGGAGTTCACCATTGGAAGATTCCTCCTTCCCTCCACTTCCCTTGACATCAATCAATGGCCAACCAAAGCCCCAAAATGAGCCTGAAAGTTCATCTAGTAACACTATGGCAGCACATTTGCGTCGGCATGGCAGCAGAAATGTATCTACTTTTGATTCTGCTAATGGCTGGCCAGTGGCAGGTCGTGGATCCGTGCAACCATCAAGTAATCCTAAGCAATCTAAAAAGCCAACAAATGTTGCTCCTGGAGTGTCAGGCAATTCCAGTCAGCCAAAGACTGTCATCAATCATGGACCTGCACCTTCAACCTATGCTAGTTCTGTCCAGGCTGTGCAGAGAACTGCTCATGGACATCTGTCTCCTGGCACATCAAGGGAAATGCGTGACAATGTTAGAATATTTCATTCTGCATCTGCTCCAAATCTCATTGCAAGTGGTCCTTTGGAACCCTCATTTTCTGATTTCCCTCCAGTATCATCTACAAAAATAAACAAATTGCCTCAGAGTAGGCAGTCTTTGACGAATGTGGAGGATGTTCATTCTGCTAACAAGTCCTTGGTTGCAAAGATCCGTTGTGCTCTTGATTTTGATCAAGATAGATACACCCTTTTTAAAGACATCTCTGCTCAATATCGCCAAGGAATAATTGATACAGGCACATATTTGGATCACGTGCAGCAGTTTGGATTGTCTCATCTTGTACTTGAGTTAGCTAGGCTGTGTCCTGATCCACAGAAGCAGAAAGAATTAGTTGATTCTCACAATGCTAGTTTGCAAAGAATTGCTTTGCGAGAAAATGATTGGGGTGGCAGTAGTATCCATCACAAAGATGGCAAGGTCTCCAAGAAAGGTAAAGGTAAAGGTAAGGTTAAAGGAAAATCCATAGATCTTGAAGAGAGGAACTTCAAAGAGAATTTAGGAGATAGCTTTATAAGCACTGTACGTCAATTACAGTTGAATCACGAGCCTTCGGAAGAGAATGAACAGGTACTATCAAAGGGTGATTACCGTAGTGCCAAAGGTAAGTCGAAAATTTTGGCTGATGAACAACTGATTGGTACTAATTCTGGTAGTATCCCGAAGCATTCTGAGCAGAGTGAAACATCGCGTGGTGGTTTTCCTAACCAGCCTAAAGATGAAGGGGCTAGTGGGAGCAAGCAACGCAAGAAAACTTCTAGGTTCCACAGAGTGCGCCTTGGTGATGGTTCTGTGGAAGCATTGTTGGATCTCAAGAGTTCAAATACCAACTCAGATCCTGGATCAACAGAGGCCTTGGAAGGTAGTAAGAGCGATGCAGGAGGGCTGCCTGTACGAGGTGTCTGGCGGAATGGGGGTGGTCATAAACTCTTTTCCTAA 2532 0.4404 MDDCCAVCAEPLEWVAYGPCLHRDVCSTCVARLRFICDDRRCCICKTQCDRVFVTKALGDFTRMINDFSVLPSDVREGQVGSYWYHEDTNAFFDDADHYKMIKAMCKLSCSVCDKMEEQAHDASKRRARFRNIEQLKGHLYRFHRLLMCSLCLEGRKVFICEQKLYTRAQLNQHINTGDSEVDGSESERGGFMGHPMCEFCRSPFYGDNELYTHMSTEHFTCHICQRQHPGHYEYYKNYDDLETHFRQEHFLCEDEGCLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHSNQQDQRRGRGRTFRRDLSESELSMTIQASFDTASVEYTSHDPATSSSGQDALGYGNFDNEPAFQSSESLATSSSESSSRYLQALGQNSRSSPLEDSSFPPLPLTSINGQPKPQNEPESSSSNTMAAHLRRHGSRNVSTFDSANGWPVAGRGSVQPSSNPKQSKKPTNVAPGVSGNSSQPKTVINHGPAPSTYASSVQAVQRTAHGHLSPGTSREMRDNVRIFHSASAPNLIASGPLEPSFSDFPPVSSTKINKLPQSRQSLTNVEDVHSANKSLVAKIRCALDFDQDRYTLFKDISAQYRQGIIDTGTYLDHVQQFGLSHLVLELARLCPDPQKQKELVDSHNASLQRIALRENDWGGSSIHHKDGKVSKKGKGKGKVKGKSIDLEERNFKENLGDSFISTVRQLQLNHEPSEENEQVLSKGDYRSAKGKSKILADEQLIGTNSGSIPKHSEQSETSRGGFPNQPKDEGASGSKQRKKTSRFHRVRLGDGSVEALLDLKSSNTNSDPGSTEALEGSKSDAGGLPVRGVWRNGGGHKLFS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4152 843 MobiDBLite consensus disorder prediction 661 685 - -
Prci1g4152 843 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Prci1g4152 843 SMART c2h2final6 220 250 IPR013087 -
Prci1g4152 843 SMART c2h2final6 251 280 IPR013087 -
Prci1g4152 843 SMART c2h2final6 108 144 IPR013087 -
Prci1g4152 843 SMART c2h2final6 196 219 IPR013087 -
Prci1g4152 843 MobiDBLite consensus disorder prediction 341 501 - -
Prci1g4152 843 MobiDBLite consensus disorder prediction 735 843 - -
Prci1g4152 843 MobiDBLite consensus disorder prediction 341 432 - -
Prci1g4152 843 MobiDBLite consensus disorder prediction 454 501 - -
Prci1g4152 843 CDD RING-HC_ZNF598 3 54 IPR041888 -
Prci1g4152 843 MobiDBLite consensus disorder prediction 304 322 - -
Prci1g4152 843 MobiDBLite consensus disorder prediction 800 816 - -
Prci1g4152 843 PANTHER ZINC FINGER PROTEIN 598 1 748 IPR044288 GO:0061630|GO:0072344
Prci1g4152 843 MobiDBLite consensus disorder prediction 741 765 - -
Prci1g4152 843 MobiDBLite consensus disorder prediction 301 324 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4152 1 843 C2H2 Transcription Factor Family AT3G62240 52.867 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4152 K22381 - gmx:100780426 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4152 1 56473471 56480729 Prci1g4152 1 56473471 56480729 ECH