Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4148 ATGGAAGATGAGCATATAATGATAGACGATTTGTCTTCTCACCTGGGATCACTTTATAAGTTCCCTAAACCAAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGATCTGAAGCTGCAGTTTATGTCCGAGAAAATGTAATAAGATTTATTTTCGAGGATGCCAGCTTCCCACAATCATCTAAAGTTGATAATCTTTTCTTACAAGAATTAGAGAACTCCCTCAGGAAGGCATTCCTTTTGGCCGACTCAGCCTTGGCTGATGATCGTAGTGTGAGCAGCTCATCAGGGACCACGGCACTTACAGCTTTGATATTTGGAAGGCTTCTGATGGTGACCAATGTGGGTGATTGTCGAGCAGTTCTTTGCCGTAAAGGGGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCATCGGAACGGAGGCGCGTTGAAGAATCAGGTGGTTACATAGACGATGGCTATCTTAATGGGTTGTTGTCGGTTACTCGAGCTCTAGGGGACTGGGATATGAAGCTTCCACGGGGCTCTCCCACACCTCTGATTGCAGAGCCAGAGTTTCGGCGAGTGGTTCTGACAGAGGACGATGAATTCCTCATCATAGGATGTGATGGAATTTGGGATGTCATGTCCAGTCAGCATGCGGTGAGTCTTGTTAGGAGAAGCCTGAGGCGGCATGACGATCCGGAGAAGGGTGCCAGAGACCTAGTCATGGAAGCTTTGCGACTGAATGCTTTTGACAATCTCACAGTCGTTGTTGTGTGCTTCACGCCCCCTGATTACAGGGAACTATCACCCGCTCAGAGGTTGACACGTTGTAGCCTCTCTACAGAAGCACTTGGTTGCTTGAGGAGTTTGTTGGAAGGCAGTGCTAGCAACTGA 888 0.4752 MEDEHIMIDDLSSHLGSLYKFPKPSAFYGVFDGHGGSEAAVYVRENVIRFIFEDASFPQSSKVDNLFLQELENSLRKAFLLADSALADDRSVSSSSGTTALTALIFGRLLMVTNVGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEESGGYIDDGYLNGLLSVTRALGDWDMKLPRGSPTPLIAEPEFRRVVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRRSLRRHDDPEKGARDLVMEALRLNAFDNLTVVVVCFTPPDYRELSPAQRLTRCSLSTEALGCLRSLLEGSASN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4148 295 FunFam Probable protein phosphatase 2C 22 1 261 - -
Prci1g4148 295 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169
Prci1g4148 295 PANTHER PROTEIN PHOSPHATASE 2C 1 256 IPR015655 GO:0004722|GO:0006470
Prci1g4148 295 Pfam Protein phosphatase 2C 1 250 IPR001932 -
Prci1g4148 295 CDD PP2Cc 1 258 IPR001932 -
Prci1g4148 295 Gene3D - 1 262 IPR036457 -
Prci1g4148 295 ProSiteProfiles PPM-type phosphatase domain profile. 1 258 IPR001932 -
Prci1g4148 295 SMART PP2C_SIG_2 3 258 IPR001932 -
Prci1g4148 295 SMART PP2C_4 4 256 IPR001932 -
Prci1g4148 295 SUPERFAMILY PP2C-like 1 260 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4148 Prci-Chr1 56434694 56437085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4148 1 291 PP2C-type Phosphatase Gene Family AT3G62260 67.687 2.32e-143 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4148 K14803 - gmx:100819791 463.381