Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4124 ATGAATCTGTCAGGCTTCTTTTCTTTCGTTTTTACATTGCTGATACTTCATTTCGAAGTCGGTAAAGCCTTCAATTGCAGAGGCCCTCTCAAAACCATAACAGTTAGGCAATCAGGCAAAGCACAGTTCAAAACCATTCAAAGCGCAATCGACTCTGTCTCTAACAAAACGCAAAACACTCGATGGATTCGTATCAAGATTTTTCCTGGAGTTTACAGACAACAGGTCATAATCTCCGGACTTCAAAGCTGCATATATCTAGAAGGAGCTGGCAGCAAGTCAACTTTTGTGGAGTGGAATGGCCACGATACACCGTTTACTACTCCTACCTTGATTTCAAGAGCAGATAATATTGTCGCAAAGGGCATTACTTTCATGAATTCACATAACCACCCGCTTGATGGCGGTGAAGCGAGACTGGCACCAGCTGAAGCAGCAAGAATAGAGGGCGACAAATGCGCTTTCTTTGAATGCGCTTTTCTGGGAGTGCAAGACACCCTCAGTGACCATGCTGGTCGCCATTACTTTCACAAGTGCTTCATCCAAGGCGCTATTGATTTCATATATGGGAATGGCCAATCTATCTACGAGGAATGCACACTCTTCTTTTCAGTGGGGGCAGATCTTCCCAAAGGAAGGGGTGGTGTTTTCACTGCACACAGAAGGGAATCAGAAGAAGATCCAAGTGCGTTTGTCTTCAAAAATTGTAACATAACTGGGAATGGCAAGGCGAAGGCTAACCTTGGGAGAGGTTATAGGTCACACTCTCGAGTCATCATTGCCAATTCGTATCTCGGCGACGTCGTTTCGCCTGCAGGTTGGGATCCTTGGAGGGGTAAAAATAATGTACAAGACCTGACGTTTGTGGAGGAGGGATGTTGGGGACCCGGCTCGAACAAGTCAAAACGAGTGCCTTGGATGAAACGTTTGAGTGGAAGCGCTCTTCGCCGATTCGTGGATAAAACTTTCATTGACCAACAAGGATGGATTGCTAGGCTTCCAGTAAAGAGCTCCTCATAA 1020 0.4578 MNLSGFFSFVFTLLILHFEVGKAFNCRGPLKTITVRQSGKAQFKTIQSAIDSVSNKTQNTRWIRIKIFPGVYRQQVIISGLQSCIYLEGAGSKSTFVEWNGHDTPFTTPTLISRADNIVAKGITFMNSHNHPLDGGEARLAPAEAARIEGDKCAFFECAFLGVQDTLSDHAGRHYFHKCFIQGAIDFIYGNGQSIYEECTLFFSVGADLPKGRGGVFTAHRRESEEDPSAFVFKNCNITGNGKAKANLGRGYRSHSRVIIANSYLGDVVSPAGWDPWRGKNNVQDLTFVEEGCWGPGSNKSKRVPWMKRLSGSALRRFVDKTFIDQQGWIARLPVKSSS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4124 339 Gene3D - 30 339 IPR012334 -
Prci1g4124 339 SUPERFAMILY Pectin lyase-like 31 335 IPR011050 -
Prci1g4124 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 330 - -
Prci1g4124 339 Pfam Pectinesterase 33 325 IPR000070 GO:0030599|GO:0042545
Prci1g4124 339 FunFam Pectinesterase 29 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4124 Prci-Chr1 56240542 56242250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4124 9 280 Carbohydrate Esterase AT2G19150 41.455 6.90e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4124 - - mtr:25501033 360.918