Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4117 ATGAATGGCACTGCCTCCCCAAAACTTGAGTCAGAAGCTTCTCCGCAGCTCAACGCAAAAGAAGCCCAGCCGCTCAAAAAACGGAAAACAGCGGTGAAAGTGAGAATTGCAGAGAATGTTGGCAAACTTAAGAACGAATGGCTGGCTTCTGATTCCTGGTCTTGGAGAAAATATGGACAAAAGCCTATTAAAGGATCTCCTCACCCAAGAGGCTATTACAGGTGCAGCACATCCAAGGGCTGCTCGGCCAGAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAGTGCTCATCGTTACTTATACCTCTACTCATAACCACCCACCTCCTTATCGTCCCTCCAACCCTAATCTAACCCTCCCAGAAAAGTCCCAAGACCAGTCCGTTGAAGATCTTCCGGCGACCTCCAAAGTGGAAGACCAGGAAGAAAAGGAAAGGCGAAAGAGTCATGAGCCCACGACGGTCCCTGATCAGTGTGTAAACGAAGAAAATTTTCATTACTTGCAATCGTCAGTTCAGTGCTCTCAAGACATTATCACTGACCAAGACCATCCTTTCGAAATGAACCCAGAGAAAACTCACGGTAGAATAGATCTCCTCTTAGAGGAAGAGCTCCCGAGTGATTCTCAGTTCAAGAGCCCATCAGCACCCAAATCCGAAGAACATGACTTTTTCGATGAACTTGAAGAGCTGCCCATATCTGCACCTTTCTTAAACTTAATCAGGCGCAATTTCTCCGAGGAAAGGACTGCGGTTGCCCTTTCATGA 768 0.4701 MNGTASPKLESEASPQLNAKEAQPLKKRKTAVKVRIAENVGKLKNEWLASDSWSWRKYGQKPIKGSPHPRGYYRCSTSKGCSARKQVERCRTDASVLIVTYTSTHNHPPPYRPSNPNLTLPEKSQDQSVEDLPATSKVEDQEEKERRKSHEPTTVPDQCVNEENFHYLQSSVQCSQDIITDQDHPFEMNPEKTHGRIDLLLEEELPSDSQFKSPSAPKSEEHDFFDELEELPISAPFLNLIRRNFSEERTAVALS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4117 255 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 236 IPR044810 GO:0003700
Prci1g4117 255 Gene3D WRKY domain 36 111 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g4117 255 Pfam WRKY DNA -binding domain 51 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g4117 255 FunFam WRKY transcription factor 65 30 110 - -
Prci1g4117 255 SUPERFAMILY WRKY DNA-binding domain 46 110 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g4117 255 MobiDBLite consensus disorder prediction 1 29 - -
Prci1g4117 255 MobiDBLite consensus disorder prediction 1 18 - -
Prci1g4117 255 MobiDBLite consensus disorder prediction 133 153 - -
Prci1g4117 255 MobiDBLite consensus disorder prediction 117 132 - -
Prci1g4117 255 SMART WRKY_cls 49 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g4117 255 ProSiteProfiles WRKY domain profile. 44 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g4117 255 MobiDBLite consensus disorder prediction 101 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4117 Prci-Chr1 56218767 56220095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4117 40 219 WRKY Transcription Factor Family AT4G01250 40.556 2.73e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1g4117 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4117 - - gmx:100127368 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4117 1 56218767 56220095 Prci1g4117 1 56218767 56220095 ECH