Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4115 ATGGGGAATGACCATTTTTCTTTTACACCTTTCAATTTCAGAGGCATCCAGGACGGTTGTAGTTCCGTACAAGGGCAAGTAGTTGCGTTCCCAGGGAAACACGTTTTCTTTCAGGAACAGATTGATTCTTTCTCTACATCGCATGGGAAAGGAACCCAATCATATGACGCTCAAATTCATCTCCAGCAAGATGTGCCCAAATCTGACATCCAAATGTTTGAAGAGTTCAGCATTGACCCTGCTCTGCAAATGACACAGCCGTTCCAGGAAATCGTGGGGCTACAGAATCAGGAAGTGGCAAGTTCAGAACTTGTTAATGAGTGCAACAATAAGAAGGTTCCACAATCTTCTTCTTTAGCATACTTGGAGCTCCTGAGCAATTACGCAAGCAGATTCAAGAAGCTAAGGGTACAAGACATAACTGACTCGAACAATAGTGAAGCTCATGTGAGTCGCCAGGATTTGTCAGCTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATGTACAATTCTCTGCTCATTGGTATGATGATTATTGCATGCCTCTGCATCCATATGCCTCTGGTCTCGAGGTTCTGTCTGAAGAAGAAAACAGAGATGTTGAACTTGCTCAATTTCTTCTTGCTGCGGCCGAGAGGGTTAGTTGCCAACAATTTGAACGTGCAAGTAGGTTGCTTCTACATTGTTTATTTAACTCATCTCCTAGTGGAAACCCTGTACAGAGAGTTGTCTTCCATTTTGCTCAAGCGCTCCAAGAGAGAATCGAAAAAGAAGCTGGGAGCACCACTTCAATGGGTTGTGCTAAGAACTTAGAAAACGAGTTGATTCAAAAGTTGGATACCAACATAGCTCTTACTTGCCATCAGAAAATCCCTTTCAACCAAGTGATGCAATTCACTGGCGTGCAAGCCATAGTGGAGCACATTGCATCTAATAGCAGAATCCATGTTATAGATGTTGATATTAGGCATGGAATGCAGTGGACATGCTTGATGCAGGCACTCGTGGGGAGGAATGAAATGAAAGTGGAGCTCTTGAAGATAACTGCTATTGGAATTGTTGGCCAACCCAATGTAGAAGAGACAGGCGAAAGATTGTCGAGTTTCGCTGAGTCGTTGAACTTGCCCTTTGTTTATAAGCGAGTTTATGTTACGGACATGATCGAAATCAAGGAACAGCAGTTTGAAATTGACGATGATGAAACTGTGGCTGTCTACGCTCCATACGTACTCAGGACTATGGTATCAAGGCCTGGATGCTTGGAAAACCTGATGAGTGTAATAAGAAATATCAAACCAACTATAATGATGGTTTCTGAAGTAGAAGCCGATCATAATTCATCCTCATTTGCCATTCGCTTCACTGAAGCATTGTTCCACTACTCAGCATTTTTTGATTGCCTTGAAACCTGCTTAAAGGATGAAAATAGGGGCAGACTGGCAACGGAAGCAATATTATCTGAAGGGATAAGAAACATTGTTGCTGCGGAGGGAAGAGAAAGAACAGTGAGGAATGTGAGGATAGAAGTGTGGAGGAGGTTCTTTGCGAGGTACAGGATGGTGGAAATTGGATTTAGTGAGTCATCTCTGTACCAAGCTTGCTTGGTTGCCAAAGGGTTTGCTAGTGGCAGATTTTGCACTCTAGACACTAATGGGAAATGCCTTATAGTTGGGTGGAAGGGGACCCCATTGCATTCCGTTTCAGCTTGGAGGTTCCTTTGA 1722 0.4332 MGNDHFSFTPFNFRGIQDGCSSVQGQVVAFPGKHVFFQEQIDSFSTSHGKGTQSYDAQIHLQQDVPKSDIQMFEEFSIDPALQMTQPFQEIVGLQNQEVASSELVNECNNKKVPQSSSLAYLELLSNYASRFKKLRVQDITDSNNSEAHVSRQDLSAEEIIRVAGARYVQFSAHWYDDYCMPLHPYASGLEVLSEEENRDVELAQFLLAAAERVSCQQFERASRLLLHCLFNSSPSGNPVQRVVFHFAQALQERIEKEAGSTTSMGCAKNLENELIQKLDTNIALTCHQKIPFNQVMQFTGVQAIVEHIASNSRIHVIDVDIRHGMQWTCLMQALVGRNEMKVELLKITAIGIVGQPNVEETGERLSSFAESLNLPFVYKRVYVTDMIEIKEQQFEIDDDETVAVYAPYVLRTMVSRPGCLENLMSVIRNIKPTIMMVSEVEADHNSSSFAIRFTEALFHYSAFFDCLETCLKDENRGRLATEAILSEGIRNIVAAEGRERTVRNVRIEVWRRFFARYRMVEIGFSESSLYQACLVAKGFASGRFCTLDTNGKCLIVGWKGTPLHSVSAWRFL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4115 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 564 IPR005202 -
Prci1g4115 573 ProSiteProfiles GRAS family profile. 194 571 IPR005202 -
Prci1g4115 573 Pfam GRAS domain family 204 571 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4115 Prci-Chr1 56203337 56205861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4115 192 572 GRAS Transcription Factor Family AT3G03450 30.513 1.95e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci1g4115 GRAS 2.2e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4115 - - gmx:100791952 677.552