Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4111 ATGGCTTCGAATCACCGTCCAGCCAGTTCAGGATCTGATGACCCAAGATCTGATGCTATGGACGAGAGGAAAAGGAAGAGGATGCAGTCTAACCGTGAATCTGCGAGGCGATCGCGGATGAAGAAGCAGAAGCAACTGGAAGATCTGACCAATGAAATCAGCCGATTGCAAAGTGCTAACAGTCAGTTAGTTCAGAGCATTAAGGAAAAGGAGGATGCATACAATGAGATCGAGTCCAACAACACTGTCCTTAGGGCACAGACTATGGAGTTGTTCGACCGATTGCGTTTTCTGAACTCGATACTTGAGATCGCTGAAGAGGTCAGCGGGCTCTCTGTTGAGATCCCCGAGATACCAGATCCTCTGCTGAAGCCATGGCAGCTTCCTTATCCGATACAGCCGATTACTGCTTCTTCAGACTTTGTCCTGCATTGA 435 0.4851 MASNHRPASSGSDDPRSDAMDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSQLVQSIKEKEDAYNEIESNNTVLRAQTMELFDRLRFLNSILEIAEEVSGLSVEIPEIPDPLLKPWQLPYPIQPITASSDFVLH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4111 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Prci1g4111 144 MobiDBLite consensus disorder prediction 11 47 - -
Prci1g4111 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Prci1g4111 144 MobiDBLite consensus disorder prediction 1 47 - -
Prci1g4111 144 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Prci1g4111 144 FunFam BZIP transcription factor 21 72 - -
Prci1g4111 144 Gene3D - 21 76 - -
Prci1g4111 144 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
Prci1g4111 144 SUPERFAMILY Leucine zipper domain 23 76 IPR046347 GO:0003700|GO:0006355
Prci1g4111 144 Coils Coil 32 87 - -
Prci1g4111 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 105 - -
Prci1g4111 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4111 Prci-Chr1 56173932 56175218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4111 1 141 bZIP Transcription Factor Family AT3G62420 55.944 7.61e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g4111 bZIP_1 9.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4111 K25786 - qsa:O6P43_010855 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4111 1 56173932 56175218 Prci3g3547 3 45213823 45215000 CCT
Prci1g4111 1 56173932 56175218 Prci1g4111 1 56173932 56175218 ECH