Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4109 ATGAAGGACCTGGACTTCAACGCGGACATTGCTCTGGCGAAGGAGTTTCTTTCGACCTTCGCAGATGCAAACGGTGAAGCCAAATACATGAACATTTTGCAAGACGTTGCTAACCACAAAACTCGAGCTGTTCAAATTGATATTGGAGACTTGATCAATTATAAAGATCTAGACGAAGAATTTCTCAGACGTGTGACTGAAAATACTCGGAGGTACATTGGAATTTTTGCCGATGCCATTGATGGCCTTATGCCAGAGCCTACTGAAGCCTTTACGGATGATGATCATGATATATTGATGACACAAAGATCTGACGAAGGAGCGGAAGGTGCTGATGGTTCAGATCCTCTTCAAAAGATGCCACCTGAGATCAAGCGGTACTTTGAAGTTTATATCAAAGCATCTTCAAAAGGGCGGCCATTTACAATCAGGGAGGTGAAGGCTTCATATATTGGTCAGCTTGTAAAGATATCTGGTATTGTGACACGATGTTCGGATGTTAAACCATTGATGCAGGTAGCTGTTTACACATGTGAGGATTGTGGTTTTGAAATTTATCAGGAAGTAACAGCTCGAGTCTTCATGCCTTTGTTTGAGTGTCCTTCTAAGCGCTGTCATATGAACCAAAGCAAGGGGAATCTTATCCTTCAACTAAGAGCATCAAAGTTCCTGAAATTTCAGGAGGCAAAAATCCAAGAACTAGCTGAACATGTTCCAAAAGGGCATATCCCCCGAACAATGACTGTTCATTTCAGGGGAGAGCTCACAAGAAAGGTAGCTCCTGGTGATGTTGTTGAATTATCTGGCATTTTTCTTCCCATACCTTTCACTGGTTACAGAGCAATGCGTGCTGGGCTAGTTGCTGATACTTACTTAGAGGCCATGTCTGTTACCCATTTCAAGAAAAGATATGAAGAGTATGAATTTTTAGGAGATGAAGAGCAGATTTTAAAATTAGCTGAAGACGGTGACATCTACAACAAGTTGGCTAGATCACTGGCTCCTGAAATTTTTGGACATGAAGATATCAAGAAAGCATTGCTGCTGCTTCTTGTTGGTGCTCCCCATCGGAAGTTAAAAGATGGGATGAAGATAAGGGGAGATTTGCATATATGTCTGATGGGTGATCCTGGCGTGGCAAAGAGTCAGCTCCTTAAACACATAATTAACGTAGCACCAAGAGGAGTGTACACCACTGGCAAAGGAAGTAGTGGTGTAGGTCTAACTGCTGCTGTTCAGAAGGATCCAGTGACCAATGAGATGGTTCTGGAAGGTGGAGCATTGGTACTGGCAGATATGGGCATTTGTGCCATCGATGAGTTTGATAAAATGGATGAATCGGATCGTACAGCTATACATGAAGTTATGGAACAGCAAACTGTTAGCATTGCCAAGGCCGGAATCACCACATCCCTGAATGCAAGGACAGCTGTCCTTGCTGCTGCCAATCCAGCATGGGGAAGATATGATCTAAGAAGAACTCCGGCAGAAAATATTAATCTCCCTCCTGCCCTGCTATCAAGATTTGATCTTCTGTGGCTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCTAGGCATGTTGTCTATGTCCACCAAAATAAAGAATCTCCTGCTCTGGGATTCACTCCTCTTGAACCATCTGTTCTCCGAGCATATATATCAACTGCAAGAAGATTATCTCCAAGTGTCCCAAGGGAATTGGAAGAGTACATTGCTACTGCATACTCTAGCATTCGCCAAGAAGAAGCCAAGTCCAGCACTCCCCATTCCTACACAACTGTCAGAACTTTGCTCAGCATTCTCCGCATATCAGCTGCATTAGCAAGACTCCGCTTTTCGGAAACTGTTGCTCAGAGTGACGTGGACGAGGCACTGAGGTTAATGCAGATGTCGAAGTTCTCTTTATACTCTGATGAGCGTCAAAGATCGGGTCTGGATGCTATATCTGATATTTATTCTATTCTGCGAGATGAAGCTGCTAGGAGTAACAGGATGGACGTAAGCTATGCCCGCGCTCTCAATTGGATATCTAGGAAGGGTTACAGTGAAGCACAATTGAAAGAGTGTTTGGAGGAGTATGCAGCGTTAAATGTTTGGCAGATACACCCCCACACTTTTGACATCCGATTCATCGATGCTTGA 2154 0.4359 MKDLDFNADIALAKEFLSTFADANGEAKYMNILQDVANHKTRAVQIDIGDLINYKDLDEEFLRRVTENTRRYIGIFADAIDGLMPEPTEAFTDDDHDILMTQRSDEGAEGADGSDPLQKMPPEIKRYFEVYIKASSKGRPFTIREVKASYIGQLVKISGIVTRCSDVKPLMQVAVYTCEDCGFEIYQEVTARVFMPLFECPSKRCHMNQSKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPFTGYRAMRAGLVADTYLEAMSVTHFKKRYEEYEFLGDEEQILKLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISTARRLSPSVPRELEEYIATAYSSIRQEEAKSSTPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEAARSNRMDVSYARALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDIRFIDA 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4109 717 Pfam MCM P-loop domain 312 535 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 14 646 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 ProSitePatterns MCM family signature. 434 442 IPR018525 GO:0003677|GO:0005524|GO:0006260
Prci1g4109 717 Gene3D - 170 224 - -
Prci1g4109 717 Pfam MCM AAA-lid domain 552 635 IPR041562 -
Prci1g4109 717 Gene3D - 10 101 - -
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 158 169 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 285 295 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 120 132 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 176 187 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 193 205 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein family signature 426 440 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein family signature 505 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein family signature 478 490 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein family signature 366 381 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 PRINTS Mini-chromosome maintenance (MCM) protein family signature 454 467 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 ProSiteProfiles MCM family domain profile. 325 531 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 FunFam DNA replication licensing factor MCM7 170 224 - -
Prci1g4109 717 CDD MCM7 328 635 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci1g4109 717 Gene3D - 311 642 IPR027417 -
Prci1g4109 717 Gene3D - 143 271 IPR012340 -
Prci1g4109 717 FunFam DNA replication licensing factor MCM7 311 642 - -
Prci1g4109 717 Pfam MCM OB domain 143 273 IPR033762 -
Prci1g4109 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 644 IPR027417 -
Prci1g4109 717 Pfam MCM N-terminal domain 14 133 IPR027925 -
Prci1g4109 717 SMART mcm 139 637 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci1g4109 717 FunFam DNA replication licensing factor MCM7 9 100 - -
Prci1g4109 717 SUPERFAMILY Nucleic acid-binding proteins 13 294 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4109 Prci-Chr1 56112787 56118771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4109 1 715 Core DNA Replication Machinery Family AT4G02060 84.637 0.0 1267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4109 K02210 - qsu:112007744 1325.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4109 1 56112787 56118771 Prci1g4109 1 56112787 56118771 ECH