Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4083 ATGTCCGAGCTAGTCAAACTTCATGCAAAGGCATTAATGCCCTCTTTTGATGATAGTAAAGAAGATCAACAACGGATTGAGATTCTCACCCAGGAGATTACTACTCTATTGAGAAAATCTGAGACGAAGCTAAAAAGACTCTCTGGTGCTAGTGGGTCCTCTGAGGATTCTAATGTCAGAAAAAATGTACAGCGCTCCCTTGCTACAGACCTTCAGAACCTTTCAATGGACCTCCGGCGAAAGCAGTCAACATACTTGAAACGGTTGCAACAGCAAAAGGAGGGATATGATGGTGTTGACTTGGAGATGAATGTGAATGGCTATAAATTTGGTTTGCAGGATGATGGATTTAGTGATGCGGGTTTCAGTGATTATCAAATGGCAAAGCTAAAGAAGAGTGAACAATTCTCGGAGGAAAGGGAAAGAGAAATAGAACAGGTCACTAAATCAGTAAACGAACTGGCCCAGATCATGAAGGATCTCTCTGTTCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAATGTTGCTACATCAGTTGAAGAGGGCTTTGAGCAGTTGGAGAAGGCTGAGAGAACGCAGAAAAAAGGAGGAATGGTTATGTGTGCAACAGTGCTTGTTATAATGTGCTTCATCATGCTAGTCCTCTTGATACTCAAGGTGATATTGTTTTAG 693 0.4156 MSELVKLHAKALMPSFDDSKEDQQRIEILTQEITTLLRKSETKLKRLSGASGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYLKRLQQQKEGYDGVDLEMNVNGYKFGLQDDGFSDAGFSDYQMAKLKKSEQFSEEREREIEQVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFEQLEKAERTQKKGGMVMCATVLVIMCFIMLVLLILKVILF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4083 230 SUPERFAMILY t-snare proteins 2 189 IPR010989 GO:0016020|GO:0016192
Prci1g4083 230 Gene3D - 1 188 - -
Prci1g4083 230 PANTHER SYNTAXIN 13 215 IPR045242 -
Prci1g4083 230 CDD SNARE_syntaxin16 138 195 - -
Prci1g4083 230 FunFam Syntaxin-43 1 188 - -
Prci1g4083 230 Pfam SNARE domain 170 222 IPR000727 -
Prci1g4083 230 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 134 196 IPR000727 -
Prci1g4083 230 SMART tSNARE_6 129 196 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4083 Prci-Chr1 55906207 55911540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4083 1 219 SNARE and Associated Proteins AT3G05710 73.059 2.06e-112 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4083 K08489 - gmx:100803629 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4083 1 55906207 55911540 Prci1g4083 1 55906207 55911540 ECH
Prci1g4083 1 55906207 55911540 Prci3g3723 3 46341967 46345959 ECH