Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4079 ATGGCGGCAGAGAGGACATTGTCGTTTTCCGTGGCATCGGTGGTGGAAGATGTGCTTCAGCAGCACGGAACTCAGCAAAAAGATTTTGATTTGGAATCTAGAAAAGCCGAAGAAACTGCATCAAGAAGATATGAAGCAGCAGGGTGGTTGAGAAAGATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCCGAGCCCTCTGAGGAAGAGTTTAGGCTTGGCTTGAGAAGTGGGATTATCCTCTGCAACGTTATTAACAAGGTTCAACCCGGAGCTGTGCCCAAGGTCGTGGAAAGTCCTATTGATTCTGCACTTATCCCGGATGGTGCGCCATTATCGGCATATCAGTATTTTGAAAACGTGAGGAACTTTCTTGACGCTATCCAGGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCGAGGATTGTGAATAGCGTTTTGGCGCTTAAATCCTATAGTGAATGGAAACAAAACGGTGCGGGTGGTGCGTGGAAATTTGGTGGAGCTCTGAAACCCACAACTTCAGGAAAATCTTTTGTCAGAAAAAATTCAGAGCCATTTACTAATTCCCTGTCAAGGACCTCATCCAATAGTGAAAAATATTTGGCTGCTTTAACCTCTGACGTTGAGCCTAATAAAATGTCAGTTTCTCATTCTTTGAGTATGCTGGTTCGTACAATGCTATTGGACAAGAAGCCTGAAGAAGTTCCGATGTTGGTTGAATCCGTTTTAAATAAAGTGGTAGAGGAGTTTGAGCATCGCATTGCAAGTCAAGGTGAACAGACAAAAGCAACTTCAAGAGACGCTGTTTCTCAAGGCAATGTTTCTGTATCAAAGCTTGTTTTGGCAGATAAGAAGGCGGAGAATAAAACTATTGTGGTTACAAAGAAAGAGGCAGTCATTCATAAAGACCGTGTCACTGGTGAGGAATTGCAAGCCCAAGTTCTGAAACAGCGAATGCACTTTGACCAGCAGCAAAGAGAAATCCAAGAACTAAAGCATACTCTTCATACCACAAAAGCTGGCGTGCAGTTCATGCAAATGAAATTTCACGAGGAATTCTCCAATCTTGGCATGCACATTAACGGCTTAGCTCATGCGGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTGTACAATCAAGTGCAGGATCTGAAGGGAAGTATTCGGGTTTACTGTCGAGTAAGGCCCTTCTTACCTGGACAATCAAGCTTTTCGAGCACAGTTGAAAATATAGAGGATGGAACAATCACAATTAATGTCTCATCAAAGAACGGGAAAGGGCGCAGATCTTTTAACTTTAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAGGTCTTCTCCGACATGCAGCCTCTCATTAGGTCTGTTCTTGATGGGTATAACGTTTGCATATTCGCGTATGGTCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCCAAAGAGATTACAGAGAAAAGCCAAGGTGTAAACTATCGGGCTCTGGGTGACTTGTTTCTTCTAGCAGATCATCGAAAGGACACTTTTCGTTATGATGTGTCTGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGAGATTTGCTAGTTACCGATGGAAGCAATAGAAGATTAGAAATTCGAAATAGTTCTCATAAGGGGCTCAGTGTGCCGGATGCAAGCCTCGTTCCTGTATCCTCAACTCCTGATGTTATTGATTTGATGAACCTGGGGCAAAGGAACCGTGCTGTTGGAGCAACTGCCCTTAATGATAGAAGTAGCCGCTCTCATAGTTGCTTGACTGTTCATGTTCAAGGAACAGATTTGACATCAGGAACTATTCTTCGGGGATGCATGCATCTTGTTGACTTGGCTGGAAGTGAGAGGGTAGACAAATCGGAGGCCACGGGAGATAGACTAAAAGAGGCACAGCATATTAACAAATCTCTCTCAGCTCTGGGTGATGTCATCGCTTCCCTTGCTCAGAAAAATCCTCACGTTCCTTACAGAAACAGCAAACTCACACAATTGCTCCAAGATTCACTTGGAGGACAGGCCAAGACACTGATGTTCGTCCACATGAGTCCTGAGAGTGACGCTCTTGGAGAAACAATTAGCACCTTAAAATTTGCCGAAAGAGTTGCTACTGTTGAGCTGGGAGCTGCTCGAGTAAACAAAGATAGTGCAGATGTTAAAGAGCTCAAGGAACAGATTGTTAGCCTTAAGGCAGCGTTGGCAAGAAGGGAGGGAGAATCAGAACACGTACCGCATTCTTTATATGGAAGCTCTGAAAGATACAGGAAAAAGGCTAGCAGTGAGCTCTCACCTTATCATACTAACAAACGGGGTGCAGATACAGTGGCGGATCACCTTGGATGTCGGCAACCTATGGTTGATGTTGGCAACATAGAGCTTCACAGTAATAGCACATTGAAGCCAAAAGCCCAGAACTTCGATTTTGATGAGATATCAACAAATTCACCGCCTTGGCCCCCAGTGAGTAGTCCTGGACCAAACTACGGGGAAGATGATAAAGAAACTGCGTCGGGAGAGTGGGTTGATAAGGTCATGGTAAATAAGCAAGATGTCAGCAAAACTGAGCCCTTGGGGAGTTGGGGAGCAGACAATGGGCACTTGTCTGATGTCTTTTATCAGAAATACCTCCAAGATTCTTCCAAGATATACACTGATCAGTCCTATAATATGTTCGTGGGAGGCAACCAGTTCAGCACCGCAGGTTCAGATGGCATGGACGATCTCGATGCTGCAACCAGTGATTCATCGGAACACGACTTACTTTGGCAGTTTAATTATTCCAAACTTCCTGGCGTCGCCAAGGGCATTGGGCTAAACACCAAGGCATCTGTCTCAAAGTTACCAAAAGGCCAGGAACTGAGCAAGAATATCATCAATTCTTCTCTTGGTCCTTCACCTTCACGGAAACAATCAAATGGTGTCTCGCATCGATCAGGAAGGCATCCAGCTTCGGTTGACGTCAAACGTAAAACTGGGATGAGAAAGTGA 3045 0.4433 MAAERTLSFSVASVVEDVLQQHGTQQKDFDLESRKAEETASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQPGAVPKVVESPIDSALIPDGAPLSAYQYFENVRNFLDAIQEIGLPTFEASDLEQGGKSSRIVNSVLALKSYSEWKQNGAGGAWKFGGALKPTTSGKSFVRKNSEPFTNSLSRTSSNSEKYLAALTSDVEPNKMSVSHSLSMLVRTMLLDKKPEEVPMLVESVLNKVVEEFEHRIASQGEQTKATSRDAVSQGNVSVSKLVLADKKAENKTIVVTKKEAVIHKDRVTGEELQAQVLKQRMHFDQQQREIQELKHTLHTTKAGVQFMQMKFHEEFSNLGMHINGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLPGQSSFSSTVENIEDGTITINVSSKNGKGRRSFNFNKVFGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALGDLFLLADHRKDTFRYDVSVQMIEIYNEQVRDLLVTDGSNRRLEIRNSSHKGLSVPDASLVPVSSTPDVIDLMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGTDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNPHVPYRNSKLTQLLQDSLGGQAKTLMFVHMSPESDALGETISTLKFAERVATVELGAARVNKDSADVKELKEQIVSLKAALARREGESEHVPHSLYGSSERYRKKASSELSPYHTNKRGADTVADHLGCRQPMVDVGNIELHSNSTLKPKAQNFDFDEISTNSPPWPPVSSPGPNYGEDDKETASGEWVDKVMVNKQDVSKTEPLGSWGADNGHLSDVFYQKYLQDSSKIYTDQSYNMFVGGNQFSTAGSDGMDDLDAATSDSSEHDLLWQFNYSKLPGVAKGIGLNTKASVSKLPKGQELSKNIINSSLGPSPSRKQSNGVSHRSGRHPASVDVKRKTGMRK 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4079 1014 Gene3D - 32 162 IPR036872 -
Prci1g4079 1014 Gene3D Kinesin motor domain 394 764 IPR036961 -
Prci1g4079 1014 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Prci1g4079 1014 ProSiteProfiles Kinesin motor domain profile. 399 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 Coils Coil 731 758 - -
Prci1g4079 1014 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Prci1g4079 1014 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 MobiDBLite consensus disorder prediction 757 790 - -
Prci1g4079 1014 CDD CH_AtKIN14-like 42 159 - -
Prci1g4079 1014 CDD KISc_C_terminal 397 726 - -
Prci1g4079 1014 SMART kinesin_4 397 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 MobiDBLite consensus disorder prediction 757 782 - -
Prci1g4079 1014 FunFam Kinesin-like protein KIN-14I isoform A 394 766 - -
Prci1g4079 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 757 IPR027417 -
Prci1g4079 1014 MobiDBLite consensus disorder prediction 1000 1014 - -
Prci1g4079 1014 Pfam Kinesin motor domain 405 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g4079 1014 MobiDBLite consensus disorder prediction 974 997 - -
Prci1g4079 1014 SMART ch_5 42 160 IPR001715 GO:0005515
Prci1g4079 1014 MobiDBLite consensus disorder prediction 974 1014 - -
Prci1g4079 1014 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 783 IPR027640 GO:0003777|GO:0007018
Prci1g4079 1014 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Prci1g4079 1014 MobiDBLite consensus disorder prediction 830 855 - -
Prci1g4079 1014 SUPERFAMILY Calponin-homology domain, CH-domain 36 169 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4079 Prci-Chr1 55838726 55844655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4079 387 724 Calmodulin-binding Proteins AT5G65930 43.068 2.62e-77 275