Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4069 ATGGCTTTCAAGCTCTTGCCCTTTCTTGCACTCTCATCTTTTTATTACCTATTTCTTTCCTCGTTTCTGTTGTTATCTACAGCAGTACCCCATCAGCATGGAAGAGCTCAAGTTCCTCCAGAAACCGTCTGCGACACCACACAACACCCTTCTTATTGCAAACATGCTCTCGCTCATCACCACGGCAACAACGTCTATGACTATGGACGTATCTCTTTTCGAAAATCCTTATCTCACTCTCACAAGTTTCTCAACCTAGTGGACTCCTATCTTCAATATCCCTCCTCTCTGTCTCAGTCCACTATCCGAGCTCTTCAAGATTGTCAATTCCTCTCTCAACTAAACTATGAATACTTATCAACCTCCTATTCCACTGTCAATCGATCTAGCTATGTTCTTCCCTACTCCAAAGCCGAAGATATTCAAACCATGCTCAGTGCCATTCTCACGAACCAACAGACTTGTTTGGACGGCCTTCAGACAACGGCTTCAGATCCGAGACTGAAGGACCGTCTTTCCGGTTCACTCCTAAACGACACTAACCTTCACAGCGTCTCACTTGCTCTGTTCGTGAGGGGCTGGGTTCCTGAAAGGAAAAACAAACCGTCATTTTCGCGCAATTTAGGTTTCCAGAATGGACGTTTGCCGTTGGAGATGTCAAAGCCAGCACGTGACATTTATGAGTATGCCAGAAGAAACGGGAGAAAACTGCTCCAAACTGTGACCGACGTTGCAAGCGTCGTGATAAGGGACATCGTGATCGTTAGTCAGGACGGAAGCGGAAACTATTCCACCATTAACGACGCCATAGCAGCTGCCCCCAATAACACCGCATCTGCGGAAGGCTATTTCTTGGTTTATATCACGGAGGGTGTGTATCAGGAATACGTAAACATAGCGAAAAACAAAAAGAACTTGATGTTACTGGGAGATGGAATTAATCGAACAGTCATCACGGGCAATCGCAGTGTTGTGGATGGGTGGACAACATTCAATTCAGCAACATTTATTGTGGTAGGACAAGGGTTTGTGGCAGTGAACATAACATTCAGAAACACGGCAGGTCCAATCAAAAGACAAGCAGTGGCATTAAGAAGTGGAGCGGACATGTCAACTTTCTACAGTTGCAGTTTCGAAGGCTACCAGGACACCCTATATACGCATTCTATGAGGCAACTTTACAGAGAGTGCGACATATATGGAACTGTGGACTTCATATTTGGCAACGCGGCTGTTGTATTACAGAACTGCAACATATACCCACGCTTGCCCATGAGTGGACAATTCAACGCAATCACAGCACAGGGTCGAACCGACCCAAACCAGAACACGGGCATTTCCATACAGAATGCCACTATAAAGGCTTCCGACGGTCTTATTGATGCTTCCCAGAATGGGACGGTGAAGACGTACCTCGGGAGGCCATGGAAGGAGTACTCGAGGACGATTTACATGCAGAGTTTCATGGACGATTTGATAGAAGCTTCGGGTTGGCGGGAGTGGAATGGGAATTTTGGTTTGGACACGCTGTACTACGCAGAATATGACAACAGGGGACGTGGTTCGGCCACCGGGAACAGGGTGACGTGGCCCGGTTACCATTTGATTAATGCCTCCGATGCCGTTAATTTCACGGCGGCTAACTTCCTGCAAGCTGATGCTTGGCTGCCGCGCACCGGCGTCCCCTTCTTCGCTGGTTTGATTTAG 1707 0.4739 MAFKLLPFLALSSFYYLFLSSFLLLSTAVPHQHGRAQVPPETVCDTTQHPSYCKHALAHHHGNNVYDYGRISFRKSLSHSHKFLNLVDSYLQYPSSLSQSTIRALQDCQFLSQLNYEYLSTSYSTVNRSSYVLPYSKAEDIQTMLSAILTNQQTCLDGLQTTASDPRLKDRLSGSLLNDTNLHSVSLALFVRGWVPERKNKPSFSRNLGFQNGRLPLEMSKPARDIYEYARRNGRKLLQTVTDVASVVIRDIVIVSQDGSGNYSTINDAIAAAPNNTASAEGYFLVYITEGVYQEYVNIAKNKKNLMLLGDGINRTVITGNRSVVDGWTTFNSATFIVVGQGFVAVNITFRNTAGPIKRQAVALRSGADMSTFYSCSFEGYQDTLYTHSMRQLYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKASDGLIDASQNGTVKTYLGRPWKEYSRTIYMQSFMDDLIEASGWREWNGNFGLDTLYYAEYDNRGRGSATGNRVTWPGYHLINASDAVNFTAANFLQADAWLPRTGVPFFAGLI 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4069 568 PANTHER PECTINESTERASE 29 557 - -
Prci1g4069 568 SUPERFAMILY Pectin lyase-like 248 566 IPR011050 -
Prci1g4069 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 192 IPR035513 -
Prci1g4069 568 SMART PMEI_2 35 189 IPR006501 GO:0004857
Prci1g4069 568 FunFam Pectinesterase 246 567 - -
Prci1g4069 568 CDD PMEI-like_3 42 190 - -
Prci1g4069 568 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Prci1g4069 568 Pfam Pectinesterase 253 553 IPR000070 GO:0030599|GO:0042545
Prci1g4069 568 Pfam Plant invertase/pectin methylesterase inhibitor 41 189 IPR006501 GO:0004857
Prci1g4069 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 190 IPR035513 -
Prci1g4069 568 FunFam Pectinesterase 41 192 - -
Prci1g4069 568 Gene3D - 247 567 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4069 Prci-Chr1 55749283 55751902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4069 1 568 Carbohydrate Esterase AT4G02330 56.410 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4069 K01051 - gmx:100792847 746.888