Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4064 ATGGAAGCCCACACCGATCACGCAGAGGATGTCGACTATGGCATGAAAACGCTTGCCTCCGGCGGTCGCTTTCTCTTCTTGATGCTAATCGTCCTCATCTGCCTTCACCAAGCTTACTCCTCCTTGTGTCGGAGCCGTCATCGTCATGGCGGAGGCCAACGGCGTCTCCCCCTTCATATTTCCTCGACCATCTCAGCCACCGCCCAGAGCAAGGGTCGTCTAGATCCTTCTCTTTTCAAGTTCCTTCCCACATTCACCTACTCGTCCACCATTCACCTTCCACTGAATGATTGTGCCATCTGCTTGTCGGAGTTGCAAGAAGGAGATGAAGTTCGCACCCTCCCAAATTGCAGCCACAGCTTTCACTCTCACTGTATTGATACGTGGTTTCGTTCTCACTCCATCTGCCCAGTGTGTCGATCCCTGGCTGAGCCGTCGCAAACTTTGAAACAAGCCTCTGTTTCCAGGGATAAATTTGTTTGTTGCTTGGATCTTCCTCTAGCGATTAGGTGTCCTAGACAGCCACCGGAGGTGATGAAGAAGACGAGCATAATCATAGAGGAGCCACTAGACGATGCGAGCAATCTGAGGAGGACAAGGCCGTCGGGTGCACGAATCCCCACACCGAAAGAATAG 636 0.522 MEAHTDHAEDVDYGMKTLASGGRFLFLMLIVLICLHQAYSSLCRSRHRHGGGQRRLPLHISSTISATAQSKGRLDPSLFKFLPTFTYSSTIHLPLNDCAICLSELQEGDEVRTLPNCSHSFHSHCIDTWFRSHSICPVCRSLAEPSQTLKQASVSRDKFVCCLDLPLAIRCPRQPPEVMKKTSIIIEEPLDDASNLRRTRPSGARIPTPKE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4064 211 Pfam Ring finger domain 96 140 IPR001841 -
Prci1g4064 211 SMART ring_2 98 139 IPR001841 -
Prci1g4064 211 MobiDBLite consensus disorder prediction 191 211 - -
Prci1g4064 211 CDD RING-H2_EL5-like 97 140 - -
Prci1g4064 211 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 26 141 IPR044675 -
Prci1g4064 211 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Prci1g4064 211 SUPERFAMILY RING/U-box 82 144 - -
Prci1g4064 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4064 Prci-Chr1 55723204 55725195 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4064 9 161 Rapid Response to Elicitors AT3G16720 36.471 5.50e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4064 - - pcin:129288941 426.017