Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4050 ATGCTAGTTGTTTCCAGAATAATGGGGCACGAGAAATGTGAAAGCTACTTAGTTTTTAGTGGTGAAACTGCGCTTGGAGACTCCTTTAGAACGTTTCTATATTTTCTCGGTCTTGCTTATTGTTTCATCGGATTATCAGCTATTACTGCTCGATTCTTTCTCTCTATGGAAAATATTGTTAAGCACAAAAGAGAGGTAGTGGAAGTAGATCCCATTACGCATGCTAAAGTTATTAGACACGACAAAGTATGGAATTACACAATTGCAGACATTAGCTTGCTGGCTTTTGGAACTAGCTTTCCTCAGATATCATTGGCCACCATTGATGCTATACAAAACATTGGAAACCTGTACGCTGGAGGTTTGGGTCCTGGAACTCTTGTTGGTTCTGCTGCCTTCGACCTTTTCCCAATACATGCTGTTTGTGTAGTAGTTCCAAAAGCTGGAGAGCTGAAAAAGATTGCTGATTTAGGAGTATGGCTTGTGGAATTATTTTGGTCCTTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAATGCGGTGACTTTGTGGGAGGCCTTGTTGACAGTAATTCAATATGGATTGCTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCGCTATATTTCTCTTCCTCTTGCAAGAAGTGAGAGGCCAGAGGATTGGGTGCCGGAAGAGACAGATTCTTTCAAACAGGAAAGCCATGACTATGAGGAGTTCTCTGAGACCGGTCCTTTGTATGCAAGAGTGCCTGCAACAGACAATGCTATTGAAACCATTGACAATGCTAAGGAAACAATGTTGGATGATGTTCATTTTTTTATACTTTGGAAACAGCAATTTGTGGATGCAGTTATGTTGGAAACAAAACATTCCAAAAAGGACAACATCTATCTCCGCGCAGCTACAATCTTCTGGCAATTCCTCCTTTTACCATGGAGACTTCTGTTTGCTTTTGTCCCTCCATGTCATATTGTTCATGGCTGGATTTCTTTCATCTCCTCTCTACTGTTTATCAGTGGGATAGCTTACATCGTGACCAAGCTTACAGATATGATAAGTTGTGTTACAGGAATAAATCCTTATGTTGTAGCTTTCACAGCACTAGCTTGCGGAACCTCGTGGCCTGATTTAGTAGCAAGCAAGATAGCTGCTGAACGCCAAACAACTGCGGACTCTGCTATTGCAAACATTACTTGCAGTAATTCAGTGAATATATATGTGGGCATTGGGGTTCCATGGCTGATTGACACGGCGTATAACTTTGTAGCGTATAGACAACCTCTGCGGATCAAAGATGCATCTGGCCTAAGCTTTTCATTGCTTGTTTTCTTCTGCACGTCTTTCGGGTGTATCATTGTTTTGGTTATTAGGCGACTAGTGTTTGGTGCAGAGCTAGGAGGGCCAAGGCTCTGGGCCTGGATTACCTGCGTCTACTTCATGTTCCTCTGGATTATTTTTGTTGTGCTATCTTCACTCAAGGTTTCTGGGGTCATATAG 1518 0.419 MLVVSRIMGHEKCESYLVFSGETALGDSFRTFLYFLGLAYCFIGLSAITARFFLSMENIVKHKREVVEVDPITHAKVIRHDKVWNYTIADISLLAFGTSFPQISLATIDAIQNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNAVTLWEALLTVIQYGLLLIHAYAQDKRWRYISLPLARSERPEDWVPEETDSFKQESHDYEEFSETGPLYARVPATDNAIETIDNAKETMLDDVHFFILWKQQFVDAVMLETKHSKKDNIYLRAATIFWQFLLLPWRLLFAFVPPCHIVHGWISFISSLLFISGIAYIVTKLTDMISCVTGINPYVVAFTALACGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLIDTAYNFVAYRQPLRIKDASGLSFSLLVFFCTSFGCIIVLVIRRLVFGAELGGPRLWAWITCVYFMFLWIIFVVLSSLKVSGVI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4050 505 PANTHER SODIUM/CALCIUM EXCHANGER 12 249 - -
Prci1g4050 505 Gene3D - 286 499 IPR044880 -
Prci1g4050 505 Gene3D - 86 222 IPR044880 -
Prci1g4050 505 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
Prci1g4050 505 Pfam Sodium/calcium exchanger protein 334 497 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4050 Prci-Chr1 55626515 55633006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4050 5 505 Antiporters AT2G47600 69.680 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4050 K03452 - gmx:100792839 811.216