Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4048 ATGAGCCGTGGAGCATCTGCAGGGGCTAAGGGCAAAAAGAAGGGAGCGACCTTCATGATCGACTGTTCAAAACCGGTGGAAGATAAGATCATGGACATCGCTTCTTTGGAGAAATTCCTTCAGGAGAGGATTAAAGTTGGTGGCAAGGCCGGAGCCCTTGGCGATTCCGTCACTGTTACTCGGGAGAAGAGCAAGATCACTGTCACTTCTGACAGCAATTTCTCCAAGAGATATCTGAAATACTTAACTAAGAAGTATTTGAAGAAACACAATGTGAGGGATTGGCTTCGGGTTATTGCTGCTAACAAGGATCGCAATGTTTATGAGCTAAGATACTTTAACATTGCTGAGAATGAGGGTGAGGATGAAGACTAG 375 0.4507 MSRGASAGAKGKKKGATFMIDCSKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEDED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4048 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Prci1g4048 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Prci1g4048 124 Gene3D - 5 124 IPR038526 -
Prci1g4048 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4048 Prci-Chr1 55612141 55613716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4048 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.710 7.44e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4048 K02891 - qsa:O6P43_010781 215.312