Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4030 ATGGTTGAAACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCAACCCCTCCTTCCAACGCCAAACGATCTAAGGTGTCCGAGGATGCATCGTCAACCAGTCTCCCATCGGCTGAAATTTTTGGTCAGGTCAACGAATCTGGAAATGAATCTCGAGAACCGGAGCTGCGGCCATCCGATCTGCCAGATGCCGATTCGTTGAAGGCTGTGGACCTGAGTGATGCGAGGTTACCTGAGAAATCCCCTGCAGTGGCTGTCGAAGGCGAGGCTCTGGTGTCGCCGAGGTCTTCAGATGAAACTGCGGTGGAAGCGGAGAAATCAAAGTCTGTTGGTGTGGCGGCGCATGGGCGGTCAAAGAAACGCCCAGCAAAGTCCACAAAATCGAGCGCCAAGGCTGCATGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCTCACTTGTCCATGTGCGGGCTCTTCAATGTTGGTGGACGTCATTGTGATTTATGTCTTAAAGATCCTGCTGCTGGTAGACGTCAATGTGATTTATGTCTTAAAGATCCTGCTGCTAGTAATATTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTGCATCTGTTGCATTACTGGAAGTTATAGGAGGTAAAGGTGTTGTCCAAGTCAATGGAAGGAACTACCATAAAAATTCCCGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTTAGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTCAGCAATAATAATATAACTGCAACAGGGGTATCCCCTTCTGTAAGTATATTAGAAGCCCGAAGTGCACAAATTAAGGGAATGCGAATTGAAGGATCTGGGGACTCTTCGGCTGTTGCAGGAGCATCAATATTAGCATCTTTGTCTAACCTTCATAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAATTGGGGAGAATGCCACTCAGAATGCTGAGGTTTTGTCTGTGACTTCTGGCCATAGGGATGATAGCGTGGACAATGAAATGAAGGATGCCACCAAAAATGATGATTCAACTGGAGGTATTTTATCTGAGAAAACTGTTCTTGCATCCTCTGCTGCTGCCAAAGAAAATCCTCATCTTGATGGCATGGAAGTAGATGCTGGTGTGGATGCAGATGTCGGGAAGGTAAATGGGGCTGCCTATGAACTAAGGCCATTGTTGCGTATGCTTGCTAGTTCTAGTACTGAATTTGATTTGGGTGGAAGCATTTCCAAAATATTGGAAGAGCGGAAGGATTTAAGAGAACTCCTCAAGGATGTTGACCCCCCTACAATCTTGGCATCAACAAGGCGGCAAGCATTTAAGAAGAGTTTACAACAAGGAATTCTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCTACATACATTCATTTGAAGTGCAATGGTTTTACAAAGTATGCTTCAGACCTCCCTTCAGTGTGCCCAAGGATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAGGAAACTTTGTCTAAAGCCCTCGCAAAACATTTTGGTGCCAGGCTACTGATTGTGGATTCGCTTTCATTGCCTGGTGGTACGCAGCCAAAGGAGTCTGATTCTGCTAAAGAAAGCTCTAGGCCTGAGAGAGCATCTATGTTTACAAAGCGTAGCGCACAGGCTGCCACATTACAGCATAAGAAGCCAACTTCCAGTGTGGATGCTGAGATTGTAGGAGGATCAACATTAAGCTCTCAGGCCATGCTGAAGCAAGAGGTATCTACTGCGTCATCTAAGGGCTCTCCCATAAAAACAGGTGACAGGGTTAAATTTGTTGGTAATGTTCCTTCAACCAGTATGTCGTTAACAAATTATCCTTCTAGGGGACCGAGTTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGACAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCAAGATGGCAATGATCTTGGAGGCCTTTGTGAAGAAGATCGGGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGCTCTGGAGTGGATGACAATGACAAGCTTGCAATAAATGAAATTTTTGAGGTTGCCTCGAATCAAAGCAGAATTGGTTCGCTAGTGTTGTTCATGAAAGATATAGAGAAAGCTATGGCTGGAAACACTGATATTTTGAAGAGTAAATTGGAAAGTTTGCACCAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAAGAGAAGACCCACCCAGGTGGCCTTCTGTTTACCAAGTTTGGGAGCAATCAGACTGCACTGCTTGACCTTGCATTTCCGGATAATTTTAGTAGGCTTCATGATAGGAGCAAAGAAACCCCCAAAACAATGAAACAACTTAGCCGCCTTTTCCCCAACAAAGTGACAATACAGTTGCCTCAGGATGAGGCTTTGCTTTCTGATTGGAAACAACAGTTGGAACGTGATGTTGAAACCATGAAAGCTCAGTCAAATGTTGCCAGCATTCGTACAGTTCTCAACAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTTGCATTAAAGATCAAGCCCTAACAACTGAAAGCGTGGAAAAAGTCATTGGCTGGGCTCTAAGTCATCATTTTATGCATCAATGTGAAGATTCAATCAAAGACTCTAAGCTTGTGATATCTACTGATAGCATTAAGTATGGGTTAAACATTCTACAGGGCATTCTAAGTGAAAGCAAGAACTTAAAGAAATCACTGAAGGACGTGGTTACTGAGAATGAATTTGAGAAAAAACTTCTTGCCGATGTTATCCCACCCAGTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTGGAAAATGTAAAGGATACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACTAAGCCTTGCAAGGGAATATTGCTCTTTGGGCCCCCTGGTACTGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATTTCAATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATCGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGGCGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGTTTGCGCACAAAAGATAAAGAGCGTATACTTGTTCTCGCTGCAACAAATAGGCCTTTTGACCTTGACGAGGCTGTTATTAGGAGGCTTCCCCGACGATTGATGGTTAATTTGCCAGATGCACTGAACAGAGAGAAAATTCTCAGAGTCATCTTAGCGAAAGAAGACTTGGCACCTGATGTTCAGTTGGAAGCAATCGCAAATATGACTGATGGATATTCAGGAAGTGACTTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATTAGAGAAATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCGTTGTCTGAGAGCAGACCTTTGCCTGCATTACGCAGCAGTGCTGACATTCGATCCTTAAAGATGGAAGATTTCAAGTTTGCACATGAGCAAGTGTGTGCAAGTGTGTCATCGGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGCGGATCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3798 0.4368 MVETRRSSSSAKRSLSSTPPSNAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAVAVEGEALVSPRSSDETAVEAEKSKSVGVAAHGRSKKRPAKSTKSSAKAAWGKLLSQCSQNPHLSMCGLFNVGGRHCDLCLKDPAAGRRQCDLCLKDPAASNILCKLRHIERGGASVALLEVIGGKGVVQVNGRNYHKNSRVILSGGDEVVFSSSGKHAYIFQQLSNNNITATGVSPSVSILEARSAQIKGMRIEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKIGENATQNAEVLSVTSGHRDDSVDNEMKDATKNDDSTGGILSEKTVLASSAAAKENPHLDGMEVDAGVDADVGKVNGAAYELRPLLRMLASSSTEFDLGGSISKILEERKDLRELLKDVDPPTILASTRRQAFKKSLQQGILNPDDIDVSFESFPYFLSDTTKNVLIASTYIHLKCNGFTKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTQPKESDSAKESSRPERASMFTKRSAQAATLQHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSPIKTGDRVKFVGNVPSTSMSLTNYPSRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIQDGNDLGGLCEEDRGFFCSANHLLRVDGSGVDDNDKLAINEIFEVASNQSRIGSLVLFMKDIEKAMAGNTDILKSKLESLHQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKAQSNVASIRTVLNRFGLDCPDLETLCIKDQALTTESVEKVIGWALSHHFMHQCEDSIKDSKLVISTDSIKYGLNILQGILSESKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVQLEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALSESRPLPALRSSADIRSLKMEDFKFAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4030 1265 Gene3D - 959 1239 IPR027417 -
Prci1g4030 1265 Gene3D - 1133 1227 - -
Prci1g4030 1265 SUPERFAMILY SMAD/FHA domain 171 240 IPR008984 GO:0005515
Prci1g4030 1265 ProSitePatterns AAA-protein family signature. 1104 1123 IPR003960 GO:0005524|GO:0016887
Prci1g4030 1265 MobiDBLite consensus disorder prediction 1 130 - -
Prci1g4030 1265 MobiDBLite consensus disorder prediction 326 351 - -
Prci1g4030 1265 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 959 1135 - -
Prci1g4030 1265 Pfam AAA+ lid domain 1154 1190 IPR041569 -
Prci1g4030 1265 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 443 1264 - -
Prci1g4030 1265 MobiDBLite consensus disorder prediction 1 51 - -
Prci1g4030 1265 MobiDBLite consensus disorder prediction 52 77 - -
Prci1g4030 1265 CDD RecA-like_ATAD1 964 1130 - -
Prci1g4030 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 960 1238 IPR027417 -
Prci1g4030 1265 SMART AAA_5 997 1134 IPR003593 GO:0016887
Prci1g4030 1265 MobiDBLite consensus disorder prediction 329 345 - -
Prci1g4030 1265 Pfam ATPase family associated with various cellular activities (AAA) 1001 1130 IPR003959 GO:0005524|GO:0016887
Prci1g4030 1265 Coils Coil 834 854 - -
Prci1g4030 1265 MobiDBLite consensus disorder prediction 543 563 - -
Prci1g4030 1265 Gene3D - 135 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4030 Prci-Chr1 55520154 55533423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4030 996 1202 Calmodulin-binding Proteins AT3G56690 36.493 2.09e-32 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4030 - - qsa:O6P43_007158 1877.45