Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4019 ATGGGGATCAAGCTCCATGGTCTGTCAATGTCCACTAATACCAGCCGAGTCATGGTGTGTCTCCATGAGAAAGACGTCGACTTTGAGCTCATTCCCGTCAACGTCTTCGCCGGAGAGCACAAGCTCCCTCCTTTTCTCTCCAAGAACCCCTTTGGTCTGATCCCAGCACTTGAAGACGACGATCTCACTCTCTTCGAATCTAGAGCTATAACAGCATACCTGGCCGAGAAATACAAAGAGACAGGACCTGATCTGATAAGGAAGAGTGACCCAAAAGAAGCGGCTTTGGTTAGGATGTGGGCAGAGGTAGAGTCCCAGTGCTACGACCCAGCAATCTCACCAATCATATTCGAGTATCTGGTATCTCCTTTCCAAGGCAAAGAACCCAACCAATCAGTAATCGAGGCCAGCATGGAGAAGGTAAAGAACGTACTGGACGTGTACGAGGCGAGACTGAGCAGCACGGAGTACCTCGCAGGGGATTTCTTCAGCCTCGCAGATCTTAACCACATAACCAACACTCACTATTTCATGAAGACGCCTTGTGCTTCCATGATCAGCGATCGTCCACATGTGAAGGCCTGGTGGGAGGATATCTCTTCCAGGCCTTCTTTCCAGAAGCTCGTTGGTGGTTTGACTTTTGGTCAGAATTGA 654 0.4969 MGIKLHGLSMSTNTSRVMVCLHEKDVDFELIPVNVFAGEHKLPPFLSKNPFGLIPALEDDDLTLFESRAITAYLAEKYKETGPDLIRKSDPKEAALVRMWAEVESQCYDPAISPIIFEYLVSPFQGKEPNQSVIEASMEKVKNVLDVYEARLSSTEYLAGDFFSLADLNHITNTHYFMKTPCASMISDRPHVKAWWEDISSRPSFQKLVGGLTFGQN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4019 217 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Prci1g4019 217 Gene3D - 87 208 - -
Prci1g4019 217 CDD GST_N_Phi 3 77 - -
Prci1g4019 217 Pfam Glutathione S-transferase, C-terminal domain 110 203 IPR004046 -
Prci1g4019 217 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Prci1g4019 217 Gene3D Glutaredoxin 2 86 - -
Prci1g4019 217 CDD GST_C_Phi 92 209 IPR034347 -
Prci1g4019 217 SFLD Main.5: Phi-like 1 209 - -
Prci1g4019 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 209 - -
Prci1g4019 217 FunFam Glutathione S-transferase F2 88 209 - -
Prci1g4019 217 FunFam Glutathione S-transferase F2 2 86 - -
Prci1g4019 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Prci1g4019 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Prci1g4019 217 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Prci1g4019 217 SFLD Main (cytGST) 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4019 Prci-Chr1 55456147 55457276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4019 1 215 Glutathione S-transferase Gene Family AT3G62760 58.140 3.71e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4019 K00799 - gmx:100815147 351.673