Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4009 ATGGCGGGCGGAACTGAAGCTTTCCCAGATTTAGGAAGACACTGCCAACATCATCATTGCAACCTCCTCGACTTCCTCCCTTTCACCTGCGACGGTTGCCACCATGTGTTCTGTCTCGAACATAGATCTTACAAGTCCCACAATTGCCCCAAATCCGACCATAACAGCCGGAAGGTTGTCGTCTGCGAAACATGTTCCGTGTCTATCGAAACCACCGGAGAAGACGACAAGGCAATCTTAGAGAGGCATGAAGAGTCCGGACTTTGTGACCCCAGGAAGAAAAAGAAACCCACCTGTCCTGTTAAGAGGTGCAAGGAGGTCTTGACGTTCTCTAATACCAGCACGTGTAAAACATGCCACATGAAGGTGTGTCTCAAGCACCGTTTTCCGGCCGACCATGCTTGTAACAGGGCCGCTTCATCTTCCTCTTCAGCTGTTAAAGCTGTTAACGGACGATGGAATGATCGGTTCTTAACTGCTCTGTCGTTAAGGAATGGAAAAGACTGTGCAAAGAGTCCTACTTCCCCGCGTCCTCCCGCTACTTCGTCTGTCAAAGCCTGCTGA 564 0.5018 MAGGTEAFPDLGRHCQHHHCNLLDFLPFTCDGCHHVFCLEHRSYKSHNCPKSDHNSRKVVVCETCSVSIETTGEDDKAILERHEESGLCDPRKKKKPTCPVKRCKEVLTFSNTSTCKTCHMKVCLKHRFPADHACNRAASSSSSAVKAVNGRWNDRFLTALSLRNGKDCAKSPTSPRPPATSSVKAC 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4009 187 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 172 - -
Prci1g4009 187 ProSiteProfiles Zinc finger AN1-type profile. 93 143 IPR000058 GO:0008270
Prci1g4009 187 SUPERFAMILY AN1-like Zinc finger 91 142 IPR035896 -
Prci1g4009 187 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Prci1g4009 187 MobiDBLite consensus disorder prediction 167 187 - -
Prci1g4009 187 Gene3D - 77 152 IPR035896 -
Prci1g4009 187 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Prci1g4009 187 Pfam AN1-like Zinc finger 99 138 IPR000058 GO:0008270
Prci1g4009 187 SUPERFAMILY AN1-like Zinc finger 5 57 IPR035896 -
Prci1g4009 187 Gene3D - 2 67 IPR035896 -
Prci1g4009 187 SMART AN1_Zf_4 99 140 IPR000058 GO:0008270
Prci1g4009 187 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4009 Prci-Chr1 55388916 55389735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g4009 2 169 C2H2 Transcription Factor Family AT3G28210 68.421 1.22e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4009 - - aprc:113867149 293.123