Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3991 ATGCATGTGTCGGGAGGTGAGGAGTGGAAACAGAGGCGGCACATGTGGCCAGTCCCTGTCACCGCGACGATTGTAGCTCCCGCTGCCGATTCTCCCTTATCCGAATTCATATGCAAAGATGGACGCAAGATCCATGTTGGTGATTGTGCACTTTTCAAGCCGCCCCAAGATTCCCCACCTTTTATAGGAATAATTCGCAAATTAACATTGAAGAAAGAAGAAAGTCCTAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATCTGAAGCTTGCAAAAGGGATCCAATTGGAAGCCGCACCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTGAGAGTGAGCGTTTATGGTGGCTAACTGATAAAGACTACATTAATGAACGACAAGAAGAAGTTGACCAGCTATTAGATAAGACGAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAGCCCTTGAATGGTCCAACATCAACACCTTCACTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTTTTCCTTTGGTTCACAGGGTAAGGGAAAGAAGAGAGAACGTGGTGATCAGGGATCTGATTCTTCTAAAAGGGAACGGTTAATCAAAACAGAAGATGGTGATACTGGTCAACATAGGCCAGAAAACATGTTAAAGTCTGAGATTGCTAAAATTACAGACAACGGTGGTCTTGTGAACTTTGAGGGAGTTGAAAGACTGGTACAACTCATGCAACCTGAAAGTGCTGACAAAAAAATAGATTTGGCTGGGCGAATAATGCTTGCTGATGTAATAGCAGTCACAGATCGGTTTGAATGTCTTGAATGGTTTGTACAGCTCAGGGGTCTGCCTGTATTGGATGAATGGCTCCAGGAAGTCCATAAGGGGAAAATTGGTGATGGTAACATGCCTAAAGAAAGTGACAAGTCTGTTGAAGAATTGCTGTTAGCTCTACTTCGTGCATTGGATAAGCTTCCAGTGAATCTTCATGCTTTGCAGACATGTAATGTTGGAAAGTCTGTGAATCATTTACGTACTCACAAGAATTCAGAAATTCAAAAGAAGGCTAGGAGCTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGTGATTCAAAATCTGGATCTACTCGGGGTGTTTCTTGGCCAGCAAAGCCTGCATCTTCTGAGGTGTCACATGTTGGAAGTAGGAAAACAGGAGGCTGTGCTGAGGTTGTTGCTAAGAGCTCTACAATGCTACCAGTTGCATCCAAAAACTGCCAGGCTAAGATTAGCTCAGGAGAATCATTGTCCAAGCTCTCACCGTCTTCCACTTCAACTAAAGCAACTACAACCTCAGTAGCCTGCAACTCAAGGGAGCAAAACATTAAAGCTGGAGCTGGAACATCAGATTTACCCTTGACACCTATTAAGGAGGAAAGGAGCAGCAGCTCTAGTCAGTCTCAAAACAACAGCTTATCTTGTTCTAGTGAACAAGCAAAAACTATTGGTTCTTGCAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAATGAGTGCGAGCAAAATTCCTGGCAGTGCATCTCGCCCCAGGAAATCAAGCAATGGTCTGCATGGGTCTGCTTTAACTGCAGTTCAAAAGGAGCCCCATTCTGGGAAAAACTTGAATAGAAACTCAGCTTCCGAGAAGGTTTCACTGAATCAACCAGCCCATGAAAAATCACCTGATGTGCATCTTCCCGATCATGGAAGTAATCAAAGACTTATTGTTAGGTTGCCAAACACTGGCCGAAGTCCTGCTAGGGGGGCTGGTGGGGGCTGTGAAGATCCTGCCATTCTGTCTGGCAAAGGCTCACCTCCTGGAGATAAGCATGAGAATGTGGATAGAAGAGGGAAATCCAAAACTGATGGTTCTCAGAATAATAACATCTCGAATATGGCCACAGATGTTTGTGATGCTAGTGAAGCAGTGGCTGATTATGAGGAAGGTAATGGCTTGCCAGCTGGTGAAGGATTAAGGGCGAGTGAAGATGGTGATAAACTCACAGAAACATCAAAGCCAACTAGTTCATCAGGATTTCTTTCCAGATCAGGGCAGACTTATGATGCTTCCTTGAGCTCCATAAATGCTTTAATTGAAAGTTGTGTGAAATTTTCTGAAGCAAGTCCCTTTGTGTCCCCGGTAGATGATGCTGGAATGAACCTGCTGGCTACTGTAGCTGCTGGAGAAATTTCTAGGTCAGAAAATGTGACGCCTGCAGTTTCTCCTGGGAGGAAGTCTCCTGCAGCAGATGAATCATGCTCAGGCAATGATAGTAAGCTTCAACATTCTGGTGAAGCAGATGATCGCACTCTTGAACATTTGAAAGGTGGGGCTACTGAAGATCATGTAAACGCCATTGATCCATCACAGCAGCTCAAAAATGATGCAAGGCATACAGTAAGATCAAGATCATGTGATCTGCCTGGAGATGGTGAAGCCACACAATCTGGTTGCAAAGAGAAAATTGGTGATGGTAGAAATCAAACGAATTCTTCCCCTACAGATTTGTCACATAATGCGGAAGGTCAATTCTTAGGGCCTGAAACCAAGGAGGAAGCTTCTGAAACAATATTGCCTGCTAAAAAGGAGAATGTTGCAGAGCCTGAGGGAGTTAGCCCTCTCCTTGAGCAGAGGAAATTGGAAACTCGTTGGGCTAAGAGCAGCATTAATTCAGACTCTAAAATAAAAATAAGGACTTCTATTGATGAAGACCAGAAGTTTGATCATGTTAATGAGAGGATGATGGAGAATGAAGTTTCAGTTTGTGAACGACCTCATGTAAGTCTAAAAATAGAGAAGGAAGTGTGTGAAAAATTACCTGAATCATCTACAGGTTCGGGTAATGAGAACCAGATTAGTGGGGAGAAAGTGGCAGGTAGTATCATCTCAGTGCAGAAGCCCACTCTGGCAGAAAACCATGAATTTTTTGAGGGCAGAAATGAGAATGTTGTTGTCCCACCTTCTGCTTCTAGTTATCCTTTGATGGAATCCAAGCCTTTGAGTGCTGCTGATGTGAAACAGGTGGAGGATAGTAAGGAAAGGCAAAGGGATCTGGACTCATCAGGGCCTGCCGTCAACAATCAGTGTACTGAAGAGAATTTGGATAGAAAAGAGGTTCTTGGTCTTGGCACTGATACAACAGTACAGTCTGAGTCCCCAAAAAATTCTGTACAAGAGAATGAAGTGCTCAAAAAGTCTTCTGGGTTTAATTTGGACAGAGTTGTGTCTGATGGTGCTGAACAACATGCCACTGGTGCTATTGATTCACTTACTGCTAGAGCGTCGGATATAGCAGTGAAGCTGGACTTTGATTTGAATGAGGGATTTCCTGTTGATGATGTGAATCAAGGGGATGTGAGACAGGAAGAACCTATCACATCATCTGCAGTCCGTGTTCTGTGTCCATCACCTTTTCCTATTTCTTCCTTGTCTGGGGGCTTCCATGCTTCAATCACTGTGGCTTCTGCTGCCCAAGGGCCTGTTATTCCACCAAGTAAGGGGGAACTTGGGTGGTCAGCTGCTAACAGTGCATTCCGGCCAGCTGAGCCCAGGAAAAACACAGAGCAGCTGTTAAGTGCTAGTGATAATAGTGCTACCAAGCAAGGTCGTGCACCTCTAGATTTTGATTTGAATGTGCCTGATCAAAGAAGTTTTGAGGATGTGGCTTCCCGTGGCTCTTCAGAGACTTGTTTAGAATCCTTGCCTCGTGACCGCGGGACTGCAGGACTTGATCTTGATTTAAACAGAGTTGATGACACTCCTGATTCTGGTGGTTTTTCTGTGAGCAAGCTGGATATTCCTTCTTTACCAACTAAACCTTCATTATCTGGTGGATTGTCCAGTGGTGGAAATGTATCAAGAGACTTTGATTTAAATAATGGGCCGGGCCTTGATGAAGTTGCCATTGAAGCTCCAGCTCGTAGCCAGCAGATAAAAAGTACTGTACCAATGCATTCGACTGTTCATGGTGTAAGAACAAGTAATGCTGATTTTGGGAATTATTCATCATGGTTTCCTTCAGGCACCTCCTATTCTGCAATCAATGTCCCACCACTTCTACCTGGTAGAGGAGAACAGAGCTTTGTTGCTGGTACTGGAGCACAGCGAATTTTGGGTCCTCCAGGTAGCACTTCTTTTGGTCCTGAAATCTATAGAGGGGCAGTTCTTTCATCCTCTCCAGCTGTTGCTTATCCTCCCAGCACACCATTTCAGTACCCTGGATTTCCTTTTGAAACCAATTTTCCTTTGTCTTCGAATTCCTTTTCTGGCTGTTCAACACCCTTTATGGACTCCTCAACAGCAGGTGGACTTTGCTTTCCTACCATGCCCTCACAGCTAGTTGGGCCTGGTGGTGTTATCTCATCCAATTTTCCCCGTCCCTATGTTATGAGTCTCCCAGGTGGCACAAGTAATGTGATGCCTGAAAATAGAAAGTGGGGAGGTCAAGCTCTCGATCTTAATTCAGGCCCTGGCAGTGCAGATACAGAGCGGAGAGATGATAGATTGTCTTCAGGGTTGAGGCAACCTCCTGTCTCAAGTTCCCAAGCCTTGATGGAGGAACAGATGAAGATGTTTCAGGTGGCAGGAGGTGTATTGAAGAGAAAGGAACCTGATGGTGGTTGGGATGGAGCTGATAGATTCAATAGCTATAAACAACCCTCTTGGCAATAG 4821 0.446 MHVSGGEEWKQRRHMWPVPVTATIVAPAADSPLSEFICKDGRKIHVGDCALFKPPQDSPPFIGIIRKLTLKKEESPSLEVNWLYRPADLKLAKGIQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIESERLWWLTDKDYINERQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTSTPSLKSGSDSVQNSFSFGSQGKGKKRERGDQGSDSSKRERLIKTEDGDTGQHRPENMLKSEIAKITDNGGLVNFEGVERLVQLMQPESADKKIDLAGRIMLADVIAVTDRFECLEWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSTRGVSWPAKPASSEVSHVGSRKTGGCAEVVAKSSTMLPVASKNCQAKISSGESLSKLSPSSTSTKATTTSVACNSREQNIKAGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEQAKTIGSCREDARSSTAVSMSASKIPGSASRPRKSSNGLHGSALTAVQKEPHSGKNLNRNSASEKVSLNQPAHEKSPDVHLPDHGSNQRLIVRLPNTGRSPARGAGGGCEDPAILSGKGSPPGDKHENVDRRGKSKTDGSQNNNISNMATDVCDASEAVADYEEGNGLPAGEGLRASEDGDKLTETSKPTSSSGFLSRSGQTYDASLSSINALIESCVKFSEASPFVSPVDDAGMNLLATVAAGEISRSENVTPAVSPGRKSPAADESCSGNDSKLQHSGEADDRTLEHLKGGATEDHVNAIDPSQQLKNDARHTVRSRSCDLPGDGEATQSGCKEKIGDGRNQTNSSPTDLSHNAEGQFLGPETKEEASETILPAKKENVAEPEGVSPLLEQRKLETRWAKSSINSDSKIKIRTSIDEDQKFDHVNERMMENEVSVCERPHVSLKIEKEVCEKLPESSTGSGNENQISGEKVAGSIISVQKPTLAENHEFFEGRNENVVVPPSASSYPLMESKPLSAADVKQVEDSKERQRDLDSSGPAVNNQCTEENLDRKEVLGLGTDTTVQSESPKNSVQENEVLKKSSGFNLDRVVSDGAEQHATGAIDSLTARASDIAVKLDFDLNEGFPVDDVNQGDVRQEEPITSSAVRVLCPSPFPISSLSGGFHASITVASAAQGPVIPPSKGELGWSAANSAFRPAEPRKNTEQLLSASDNSATKQGRAPLDFDLNVPDQRSFEDVASRGSSETCLESLPRDRGTAGLDLDLNRVDDTPDSGGFSVSKLDIPSLPTKPSLSGGLSSGGNVSRDFDLNNGPGLDEVAIEAPARSQQIKSTVPMHSTVHGVRTSNADFGNYSSWFPSGTSYSAINVPPLLPGRGEQSFVAGTGAQRILGPPGSTSFGPEIYRGAVLSSSPAVAYPPSTPFQYPGFPFETNFPLSSNSFSGCSTPFMDSSTAGGLCFPTMPSQLVGPGGVISSNFPRPYVMSLPGGTSNVMPENRKWGGQALDLNSGPGSADTERRDDRLSSGLRQPPVSSSQALMEEQMKMFQVAGGVLKRKEPDGGWDGADRFNSYKQPSWQ 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3991 1606 MobiDBLite consensus disorder prediction 1229 1315 - -
Prci1g3991 1606 ProSiteProfiles BAH domain profile. 42 157 IPR001025 GO:0003682
Prci1g3991 1606 Pfam TFIIS helical bundle-like domain 357 406 IPR017923 -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 413 438 - -
Prci1g3991 1606 SMART BAH_4 42 157 IPR001025 GO:0003682
Prci1g3991 1606 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1606 - -
Prci1g3991 1606 Gene3D - 31 268 IPR043151 -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 871 889 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 1523 1606 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 1237 1251 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 467 501 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 1033 1088 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 181 255 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 657 671 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 698 735 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 783 816 - -
Prci1g3991 1606 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 419 IPR035441 -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 220 255 - -
Prci1g3991 1606 Pfam BAH domain 43 151 IPR001025 GO:0003682
Prci1g3991 1606 SMART TFS2_5 329 408 IPR003617 GO:0005634
Prci1g3991 1606 CDD TFIIS_I 362 407 - -
Prci1g3991 1606 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 275 410 IPR035441 -
Prci1g3991 1606 ProSiteProfiles TFIIS N-terminal domain profile. 323 409 IPR017923 -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 720 735 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 191 219 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 1053 1069 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 512 604 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 830 892 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 467 681 - -
Prci1g3991 1606 MobiDBLite consensus disorder prediction 1556 1570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3991 Prci-Chr1 55283868 55291318 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Prci1g3991 BAH 7.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3991 - - pcin:129308611 3117.79