Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3989 ATGTCACAAGGTTACGCTATCGAGCTCTACTTCGATCCTGCTCTAGAAAACCAGGTGTTGAAGGCCTGGAATGTACTGGCTCGCAGACAAATCAGCACCCACCTCATCGAAATCGAGTCTCGCCCGCACATCACTCTCTTTTCCAGCCCCTGTGTTGATTCCGCGAAGCTTGAATCAGTCGTCAAGAGTTTCGCTGCCAAGCGGGAACCCTTGCCTATTTCTTTCTCTTCAATCGGGTGCCTACCAAACGACAATAATGTACTCTTTCTTTCACCGACCCCTTCAATTTGGCTGCTTCAGTTCCAATCTCAGTTGTTTGATGCAATGAAGAAAGAAGGTTTCGAGATAGGAGAGGATTATCGCCCAGATTCTTGGATTCCTTATTGTGCGGTTGCTCAGGAAGTGCCAAAGATTAGGATGGCCGAGGCTGTTTGTGTCTTGCGGGACTTGAAATTGCCGGTTTCTGGGTATGCCATGGATATTGGACTGGTGGAGTTGTCTCCCGCTCGCGAGCTCTTCTCATTTGTGCTTGGTAATTCAGTAGAAACATGA 552 0.4819 MSQGYAIELYFDPALENQVLKAWNVLARRQISTHLIEIESRPHITLFSSPCVDSAKLESVVKSFAAKREPLPISFSSIGCLPNDNNVLFLSPTPSIWLLQFQSQLFDAMKKEGFEIGEDYRPDSWIPYCAVAQEVPKIRMAEAVCVLRDLKLPVSGYAMDIGLVELSPARELFSFVLGNSVET 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3989 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Prci1g3989 183 SUPERFAMILY LigT-like 4 133 IPR009097 -
Prci1g3989 183 PANTHER - 1 181 - -
Prci1g3989 183 Pfam 2'-5' RNA ligase superfamily 41 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3989 Prci-Chr1 55276079 55277355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3989 1 183 Calmodulin-binding Proteins AT5G40190 71.038 7.49e-89 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3989 - - cave:132181051 315.079