Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3969 ATGAAGGAGAAGAGCGAGAGTGGAGGTGGAGGGTATGTGAGAGCAGATCAGATAGATCTGAAGAGCTTGGACGAGCAGCTTCAGAGGCATCTGACACGAGCATGGACGATGGAGAAGAACAAGAATAATAAAGAAGAGGAGAGTGGAGGGAGGTCTACCCAAACGAGGCAAGAATGGGAGATTGACCCTTCCAAGCTCATCGTCAAAAGCGTCATTGCTCGCGGCACTTTTGGCTCCGTTCACCGTGGCATTTATGATGGCCAAGATGTTGCAGTGAAGCTCCTTGACTGGGGAGAAGAGGGCCATCGGTCAGAAGCTGAAATAGCTTCTCTGAGAGCAGCTTTTACGCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAACGTAACAAAGTTCATTGGAGCAACAGTGGGCTCATCAGATCTACACATACAAATGGAAAATGGTCATATAGGAATGCCAAGTAATATTTGTTGTGTTGTTGTTGAGTATTGTCCTGGGGGTGCACTCAAGTCTTACCTCATCAAAAACAGGAGAAAGAAGCTCGCATTTAAAGTGGTTGTCCAACTGGCACTTGATCTTGCAAGAGGGTTGAGCTATCTCCACTCGAAGAAGATTGTCCACAGAGATGTCAAAACAGAAAACATGCTTTTAGACAAGACACGAACCTTGAAGATAGCTGACTTTGGAGTAGCTCGCATTGAGGCTTCTAATCCTCATGACATGACTGGGGAAACTGGAACTCTTGGTTACATGGCTCCAGAGGTTTTAAACGGTAGTCCATATAATAGAAAGTGTGATGTGTATAGTTTTGGTATATGCCTATGGGAGATATACTGCTGCGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTGACGTCTGCTGTTGTCCGTCAGAATCTGAGGCCAGAGATACCTCGATGTTGCCCAAGCTCTCTGGCAAATGTAATGAAGAGATGCTGGGATGCGAATCCTGACAAGCGACCAGAGATGGATGAGGTGGTGACAATGTTGGAAGCTATAGACACTTCAAAAGGTGGAGGCATGATCCCTCATGATGAGCCCCAAAGTTGTCTTTGTTTCCGAAGATACCGTGGACCTTGA 1110 0.4631 MKEKSESGGGGYVRADQIDLKSLDEQLQRHLTRAWTMEKNKNNKEEESGGRSTQTRQEWEIDPSKLIVKSVIARGTFGSVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATVGSSDLHIQMENGHIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGSPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPHDEPQSCLCFRRYRGP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3969 369 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 343 - -
Prci1g3969 369 SUPERFAMILY Protein kinase-like (PK-like) 43 340 IPR011009 -
Prci1g3969 369 FunFam Kinase suppressor of Ras 1 55 150 - -
Prci1g3969 369 FunFam Serine/threonine-protein kinase HT1 166 351 - -
Prci1g3969 369 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3969 369 Pfam Protein tyrosine and serine/threonine kinase 68 340 IPR001245 GO:0004672|GO:0006468
Prci1g3969 369 MobiDBLite consensus disorder prediction 33 58 - -
Prci1g3969 369 MobiDBLite consensus disorder prediction 33 53 - -
Prci1g3969 369 PRINTS Tyrosine kinase catalytic domain signature 163 176 IPR001245 GO:0004672|GO:0006468
Prci1g3969 369 PRINTS Tyrosine kinase catalytic domain signature 311 333 IPR001245 GO:0004672|GO:0006468
Prci1g3969 369 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Prci1g3969 369 PRINTS Tyrosine kinase catalytic domain signature 201 219 IPR001245 GO:0004672|GO:0006468
Prci1g3969 369 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Prci1g3969 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Prci1g3969 369 SMART serkin_6 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3969 369 CDD STKc_MAP3K-like 72 340 - -
Prci1g3969 369 Gene3D Transferase(Phosphotransferase) domain 1 166 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3969 Prci-Chr1 55148802 55152459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3969 1 307 MAP Kinase Kinase Kinase AT3G01490 76.218 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci1g3969 PK_Tyr_Ser-Thr 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3969 - - tcc:18600745 693.73