Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3951 ATGGAGCATGTATCAGAAAAAAGATTTCCTCTCAATGCAAAAGATTATAAGTTATATGAAGAAGTTGGTGAAGGTGTTAGTGCCACTGTGTATAGGGCACTCTGTGTGCCACTCAACAAAACAGTTGCTATCAAAGTTCTTGATCTCGAAAAGTGCAACAATGATCTGGATGGCATCAGGAGAGAGGTACAAACGATGAGCTTGATTGATCATCCGAATGTTTTACGGGCATATTGTTCATTCACTGCTGGGCACAACCTTTGGGTTGTGATGCCATACATGGCTGGGGGATCCTGCCTTCATATAATGAAATCTGACTATTCTGAGGGATTTGAAGAGCCTGTTATTGCTACTTTATTGCGGGAGGTTCTCAAAGCTCTTGCCTATCTTCATGCTCATGGCCACATACATAGAGATGTAAAGGCTGGGAATATTTTGATTGATGTTGACGGTATGGTCAAATTAGCTGACTTTGGGGTGTCAGCTTGTATGTTTGATGCTGGAGATAGGCAACGATCAAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAACAATTACATGGATATGACTTCAAGGCAGACATTTGGTCATTTGGTATAACAGCACTTGAACTCGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTGCTTATGACGTTACAGAATGCTCCTCCAGGCCTTGATTATGAAAGAGACAAGAGATTTTCTAAGTCGTTCAAAGAGATGGTCGGAACCTGCTTAGTGAAGGACCCAAAGAAACGGCCAACTTCAGAAAAACTTTTAAAACACCCTTTCTTCAAACATGCACGCTCCACGGAATATCTAACTCGAACTATTCTAGATGGTCTTGCTCCTCTAGGAGAACGTTTTAGGAAGTTGAAGGCAAAAGAGGCTGATTTATTGGTGCAGAATAAGGCTCTTTATGAGGATAAAGAACAACTATCACAGAAGGAATATATTCGAGGAATCAGTGCATGGAATTTTAACCTTGAGGATTTAAAAAGCCAAGCTGCTCTTATTCAAGATGATGACTTGAATGCAGAAGAGCCAGATATGGATAAGAAGCAAAAAAACAAATCTGATGATAATGGGGTTCCTGCAGAAGGGTCATTGGCAGTAACAGCTAACGATTCAGATGCTAAACCCACATTGGATAAGGATGGGTTCAGTGATTTTCAGGATTTGGAGAGTTCACTCGCTTCATTTCCAATTAAACCTCTTAAAGCGCTCAAAGGCTGTTTTGACATTTTTGAGGATGATGCAAATAACACTAGTCTGAGAGATTTGGACCAGGATTATGGAAGAAACGAGAATGGAAGTTCTGGGCTTAGCTTAGTGCCACAAAATGCTTTAACTGAGCATAAAAAGCATTTGAGTGGTTCTTTGGTGCCTGATAATTTTCTCTCCCCTAAAAAGGTTGTTACTGATGGGGACAGGGATTATTTGCAAGCAAAATATAATTCTGATCGGAATCATAGTGGACCCTTGTTATATCGTCAGAAGAGAGACACCAACAACCACCTTGCATCCCTTGATGATGCATCGGAAGGAGCAGTTATCCAGCGCAAGGGTCGGTTTCAGGTTACCTCGGCGGATCTCAGTCCAAAGGGTCCTTCAAACTGCACTTTTGGCGGCCTGGTTTCTGGAGGTTCTATTGGCCCCCCAAATCAGAACTCTACAGTTGCTTCTATTCTTCCTTCATTGCAGTTCATTTTGCAACAGAACAGCATGCAAAGGGAAGAAATTATTAAATTAATAAAGTATGTGGAGCAATCTTGTGGCAAGTATACTGAATCAACAGAGGCAGGGATAGTTGATCTTTCGCAGGTACCACCTTCAACAAATAGGGAGAGAGAACTGCATGCTCAGGTGATTCAATTACAACAGAGCATTGGGAGTCTTGTTGAGGAAGTGCAAAGACAAAAAATGAAAAATGCCCAGTTAGAGAAGCAGTTGAACTCGATGTCCAACAGAGTGGAAGAGTGA 2019 0.4165 MEHVSEKRFPLNAKDYKLYEEVGEGVSATVYRALCVPLNKTVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLRAYCSFTAGHNLWVVMPYMAGGSCLHIMKSDYSEGFEEPVIATLLREVLKALAYLHAHGHIHRDVKAGNILIDVDGMVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVGTCLVKDPKKRPTSEKLLKHPFFKHARSTEYLTRTILDGLAPLGERFRKLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDCXNAEEPDMDKKQKNKSDDNGVPAEGSLAVTANDSDAKPTLDKDGFSDFQDLESSLASFPIKPLKALKGCFDIFEDDANNTSLRDLDQDYGRNENGSSGLSLVPQNALTEHKKHLSGSLVPDNFLSPKKVVTDGDRDYLQAKYNSDRNHSGPLLYRQKRDTNNHLASLDDASEGAVIQRKGRFQVTSADLSPKGPSNCTFGGLVSGGSIGPPNQNSTVASILPSLQFILQQNSMQREEIIKLIKYVEQSCGKYTESTEAGIVDLSQVPPSTNRERELHAQVIQLQQSIGSLVEEVQRQKMKNAQLEKQLNSMSNRVEE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3951 673 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3951 673 MobiDBLite consensus disorder prediction 360 374 - -
Prci1g3951 673 Gene3D Transferase(Phosphotransferase) domain 1 97 328 - -
Prci1g3951 673 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Prci1g3951 673 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3951 673 SUPERFAMILY Protein kinase-like (PK-like) 13 300 IPR011009 -
Prci1g3951 673 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3951 673 MobiDBLite consensus disorder prediction 437 457 - -
Prci1g3951 673 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Prci1g3951 673 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Prci1g3951 673 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Prci1g3951 673 Coils Coil 643 673 - -
Prci1g3951 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 654 IPR047173 GO:0043539
Prci1g3951 673 CDD STKc_OSR1_SPAK 14 277 - -
Prci1g3951 673 MobiDBLite consensus disorder prediction 352 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3951 Prci-Chr1 55005614 55015750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3951 1 670 MAP Kinase Kinase Kinase Kinase AT5G14720 66.909 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Prci1g3951 Pkinase 6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3951 K08835 - gmx:100778837 1052.35