Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3927 ATGCTGAATATTTCGGTGTCACTGTCTTCTATGACTCCACATATCATACCTTGGTCACGAAATCCCATAATTAAGCTCCCTCAACTTTCGCACGCATTGTCTTATAGTGCCGCCACTGATTCCCATTCTTTCTCTGGACTTTCACGTGGGAAAGCTTCTTGCCCACCTTCTTATTTTTGTGTTAGAGCTCAAAAATCAGCTTCATTTCTCGTTCTAAGTCGAAAAAATGTAACCTTTAAGGTCGCCGCTGCTTTGGTGCCTGAAGCTAACAGTGATGCTGATGAGCCCAGCAAACCCAATACTTTGATTCGGACTCTACAGCTTGGGGCCATGTTCGGAATTTGGTACGTTTTGAACATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGCCTATCCATTTCCAGCGACAGTGACAGCATTTCAGTTTGGTTACACTACGCTGATGATTACTTTGATCTGGACGTTTAATCTCTACCCCAAACCAACGATCAGTAGGTCACAGCTTCTAGCAATCCTTCCGCTGGCTGTAGCTCACACAATAGGTAACCTTTTGACTAACATTAGCTTTGGAAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCATTGGAGCCTCTCTTCACAGTTGTTCTTGCTTCTCTGTTTCTTGGGGAGCAACCTACTTTCTGGGTGGTTACTTCCCTTGTGCCAATAGTTGGTGGAGTGGCACTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGTTTCGGCAGTGCTATGGCATCTAACCTTATCAACCAATCACGGAATGTATTGAGCAAAAAACTCATGGTCAATGAAGAGGAAAGCTTGGACAACATAAACCTCTACTCAGTCATATCGATGATTTCCTTCATTCTTTCGATCCCATTTGCCATTTCTATGGAAGGATTCAAGTTTGCACCTTCATTCCTGCAATCTGCTGCAAGCCAAGGATTGAATGTTAGAGAGCTATGTGTGAGATTGCTGCTGGCTGGATTCTGCTTCCACGCTTATCAACAGGTTTCTTATGGGATATTACAGAGGGTATCCCCGGTGACTCACTCGGTCGGGAACTGTGTGAAGCGTGTGGTTGTCATAGTATCCTCAGTCATCTTCTTTCAAACTCCTGTCTTGCTGGTCAACACCCTTGGAACTGCGGTGGCACTTGGTGGCGTGTTCTTTTATTCAAGGGCTAAGCGGAAGGAGCCGAAAGGGGCGACATAG 1233 0.4453 MLNISVSLSSMTPHIIPWSRNPIIKLPQLSHALSYSAATDSHSFSGLSRGKASCPPSYFCVRAQKSASFLVLSRKNVTFKVAAALVPEANSDADEPSKPNTLIRTLQLGAMFGIWYVLNIYFNIYNKQVLKAYPFPATVTAFQFGYTTLMITLIWTFNLYPKPTISRSQLLAILPLAVAHTIGNLLTNISFGKVAVSFTHTIKALEPLFTVVLASLFLGEQPTFWVVTSLVPIVGGVALASMTEVSFNWIGFGSAMASNLINQSRNVLSKKLMVNEEESLDNINLYSVISMISFILSIPFAISMEGFKFAPSFLQSAASQGLNVRELCVRLLLAGFCFHAYQQVSYGILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVLLVNTLGTAVALGGVFFYSRAKRKEPKGAT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3927 410 PANTHER SOLUTE CARRIER FAMILY 35 107 403 - -
Prci1g3927 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 243 - -
Prci1g3927 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 323 405 - -
Prci1g3927 410 Pfam Triose-phosphate Transporter family 106 399 IPR004853 -
Prci1g3927 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3927 Prci-Chr1 54841055 54845352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3927 79 410 Antiporters AT5G33320 62.048 1.64e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3927 K15283 - gmx:100819280 514.612