Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3918 ATGCAATCTCACTTCTCCTCTAAGCCTTCCTTCCTCCTCCCCGTCGACGTCCAAGAGAGAGCCACCGTGTTCCGCCCACTTTCGCTCGCCCCACCTCACATGCGCGCCTTCCATCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTTCCCGTTATCCTCCACGACCTCCACCTCACCCCCACTGACATTGGCAACGCCGGCGTCGCCTCCTTCGTCGGCTCCATCTTCTCCCGCCTCCTCATGGGCCCCATCTGCGACCTCGTCGGCCCCCGCATAGCCTCCGGCACTCTCTCCCTCCTAACAGCACCTGTCATCCTCGCAACCGCTTTCGTGTGCACACCCCAATCCTTCATCATCATTCGCTTCCTCGTCGGCTTCTCTCTGGCCAACTTCGTGTCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCCCCTCCATAGTAGGCCTGGCTAATGGTGTTGCAGCCGGGTGGGCCAACGTGGGCTCGGGTGTGACCCAACTTGTTATGCCTCTGATCTACTCTCTCATCATGCACTTCAACGTCCCGTCTTCCATTGCTTGGAGGCTTGCGTTTGTTGTTCCTGCAATTTTCCAAGCAACCACAGGGATACTGGTCCTGGCTTTCGGGCAAGACCTGCCTTCGGGGAAATACGTGCGTACCAGCCAGACCCAGAAGGGTGAAAGAGAGAACGCATTGAAGATTGTATTGGAGGGCTTGACCAATTACAGAGGGTGGATTTTGGGCCTGCTTTATGGGTTCTCTTTCGGGGTGGAACTAACTACAGACAACATAATAGCACAATACTTTTATGACAGGTTTGACGTGAATATTGAAGTTGCGGGGAGTATAGCGGCAAGTTTTGGGATGGCGAATTTGTTCTCGCGGCCTCTGGGAGGAGTGATTTCTGATGGGATGGGAAGGAGGTTTGGCATGAGAGGGAGATTGTGGGGTTTGTGGGTGGTCCAAACAGTGGCTGGAGTTCTCTGTGTGTTACTTGGACGCCTCAACTCTCTCTGCAGCTCTATCCTCGTCATGTGTGCTTTCTCCGTGTTTGTCCAAGCAGCTTCTGGCCTCATATTCGGTGTCGTCCCCTTCGTTTCCAAGAGATCGCTTGGAGTAATTTCAGGGATGACGGGGAGCGGAGGGACTGTTGGGGCCGTGGTGACTCAAACGCTGTTGTTTTCAGGGGCCCAATTCTCAAGGCAAACAAGCATATCTCTGATGGGCATTATGATGGTACTGTGCACTCTTCCAGTGACCTTGCTGTATTTCCCTCAATGGGGAGGCATGTTCTGTGGCCCTTCATCAGATGCCGATTCCCCTGAAGAAAATGATCGCCTGCTACATTAG 1377 0.5403 MQSHFSSKPSFLLPVDVQERATVFRPLSLAPPHMRAFHLAWLNLFSCFFSTFSIPPLLPVILHDLHLTPTDIGNAGVASFVGSIFSRLLMGPICDLVGPRIASGTLSLLTAPVILATAFVCTPQSFIIIRFLVGFSLANFVSSQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQLVMPLIYSLIMHFNVPSSIAWRLAFVVPAIFQATTGILVLAFGQDLPSGKYVRTSQTQKGERENALKIVLEGLTNYRGWILGLLYGFSFGVELTTDNIIAQYFYDRFDVNIEVAGSIAASFGMANLFSRPLGGVISDGMGRRFGMRGRLWGLWVVQTVAGVLCVLLGRLNSLCSSILVMCAFSVFVQAASGLIFGVVPFVSKRSLGVISGMTGSGGTVGAVVTQTLLFSGAQFSRQTSISLMGIMMVLCTLPVTLLYFPQWGGMFCGPSSDADSPEENDRLLH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3918 458 Gene3D MFS general substrate transporter like domains 32 229 IPR036259 -
Prci1g3918 458 SUPERFAMILY MFS general substrate transporter 27 432 IPR036259 -
Prci1g3918 458 ProSitePatterns Sugar transport proteins signature 1. 307 322 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci1g3918 458 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 6 449 IPR044772 GO:0015112
Prci1g3918 458 CDD MFS_NRT2_like 37 430 IPR044772 GO:0015112
Prci1g3918 458 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 430 IPR020846 GO:0022857
Prci1g3918 458 Pfam Major Facilitator Superfamily 41 395 IPR011701 GO:0022857|GO:0055085
Prci1g3918 458 Gene3D MFS general substrate transporter like domains 238 437 IPR036259 -
Prci1g3918 458 FunFam Nitrate transporter 2.1 237 438 - -
Prci1g3918 458 FunFam Probable high-affinity nitrate transporter 2.4 29 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3918 Prci-Chr1 54746428 54748706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3918 6 443 Inorganic Solute Cotransporters AT5G14570 64.978 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3918 K02575 - qsa:O6P43_008930 693.73