Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3906 ATGAATACGACGCCGTTCATGGATAAGCAGATAATGGATCTAACCCAAGGATCGTCTTCGAGCAAGGATTTCATCGACCTGATAAGCCATCCTAAGGAAGAAGAAGGGGCAGACGTGGTAGGTGAAGTTCGCCGTGGCAGCCACCACCAAATCGGTGGCAATGGGATTAAGGAGGATATCATTCCCAGTTACGATTTCCAGCCGATTCGCCCACTCGGAGCTTCGATTCAGTCTCCCAATCACGATTCCAACCCTAATATGGGAGGGATTTCGAGGTCTTGGAATTCTGATTCCAAGTCTAACTTTTCCACCCCAACCCTTAGAAATTATAATTCTCTGGACTCTCTAGAACCTGCAAAAGTCACAGCAGAAAAGGATCAAAATGCTTTTGATGATGCAATATTGTCTGAGATAGATCAAACCATGAAGAAGCATATGGAGAATCTGCTTCATGTTCTGGAAGGCATCAGTGCGAGGCTAACACAACTAGAAAGCAGAACCAATCATCTTGAAAATTCTGTGGATGAGTTGAAGGTATCTGTTGGAAACAATCATGGTAGCACTGATGGAAAAATGAGACAGCTCGAGAATATCCTTAGAGAGGTGCAAATGGGTGTACACGTTTTAAAGGATAAGCAAGATGTGGTGGAAGCTCAACTGCAGGTGGCAAAGCTCCAAGTGTCCAAGGTGGACCAACAATCAGAGACTCACGCTAGTGTGATTCCAGATCCTGCACAGCAAACTGCATCAGCTCCTCAGCAATCGCAACAACAGCTTCCTTCCCCTGTTAACACTCCACAGTCAGTTGCTGCGGTCCCTCACCCTAATGCTCCACCTCAACCTCTGTCCCAACAGAGTTTGCCACCTCCAATTCAACTTCCTAGTCAATTTCCTCAGAACCAAATTCCTTCTGTTCCTCAGCGAGAACCGTACTTCCAACGAGCACCTCAATCTCATGAAACCCCAAATCAGCAATATCAATTGCCTCTGTCTCAGCAGCCACATCCTCCTCCTGGGGCACCTCCGCAGCTGCAATATCAACAGAACCCACAGCCCCAATTCCCTCAGCCTGTACCTCATCCACCTCAACAACAGCCATCACCTTCTCCTGTTAATCCCCCACCTCAACTCCCATCTTCAATGGGTCACCATGTGGAGGATACATCATATACCCCTCCTCAGACTTACCCACCCAATGTCCGCCAGCCACCGCCCATTGGACCACCTCCTGCTCAGCAATTCTTTGGATCGCCATCCCATGTGTTCGAACCACTATCTAGTAGACCTGGTTCAGGTTTTTCTTCTGGATATAGTGCACCATCTCTACCTGCTGAGCCATATCATTATGGTGGATCGCCTCAGTATGGTGGCACTTCAGGGATAAAACCACACCTGCCTCCTTCTGCGGTGGCTCCTCCAAGCGGTGGAAGTGGTTACCCACAGCTTCCAACTGCTCGGGTGCTGCCCCATGCATTGCCTACAGCTTCAGGGGCCAGTAGCAGTTCTGGATCTGGTGGAAGTGGAAATCGAGTTCCATTAGACGATGTGGTTGACAAAGTGGCAAGTATGGGATTCCCTAGAGACCTTGTGAGGGCAACAGTTCGGAAGCTAACAGAGAATGGTCAAGCAGTTGACCTTAACGTAGTGCTGGATAAGCTTATGAACGAAAGTGATATCCAGCCAAGAGGTTGGTATGGTCGGTAG 1704 0.4859 MNTTPFMDKQIMDLTQGSSSSKDFIDLISHPKEEEGADVVGEVRRGSHHQIGGNGIKEDIIPSYDFQPIRPLGASIQSPNHDSNPNMGGISRSWNSDSKSNFSTPTLRNYNSLDSLEPAKVTAEKDQNAFDDAILSEIDQTMKKHMENLLHVLEGISARLTQLESRTNHLENSVDELKVSVGNNHGSTDGKMRQLENILREVQMGVHVLKDKQDVVEAQLQVAKLQVSKVDQQSETHASVIPDPAQQTASAPQQSQQQLPSPVNTPQSVAAVPHPNAPPQPLSQQSLPPPIQLPSQFPQNQIPSVPQREPYFQRAPQSHETPNQQYQLPLSQQPHPPPGAPPQLQYQQNPQPQFPQPVPHPPQQQPSPSPVNPPPQLPSSMGHHVEDTSYTPPQTYPPNVRQPPPIGPPPAQQFFGSPSHVFEPLSSRPGSGFSSGYSAPSLPAEPYHYGGSPQYGGTSGIKPHLPPSAVAPPSGGSGYPQLPTARVLPHALPTASGASSSSGSGGSGNRVPLDDVVDKVASMGFPRDLVRATVRKLTENGQAVDLNVVLDKLMNESDIQPRGWYGR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3906 567 MobiDBLite consensus disorder prediction 331 345 - -
Prci1g3906 567 Coils Coil 146 180 - -
Prci1g3906 567 MobiDBLite consensus disorder prediction 494 508 - -
Prci1g3906 567 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 565 - -
Prci1g3906 567 Pfam UBA-like domain (DUF1421) 514 557 IPR010820 -
Prci1g3906 567 MobiDBLite consensus disorder prediction 229 513 - -
Prci1g3906 567 PRINTS Proline rich extensin signature 287 299 - -
Prci1g3906 567 PRINTS Proline rich extensin signature 355 371 - -
Prci1g3906 567 PRINTS Proline rich extensin signature 332 353 - -
Prci1g3906 567 PRINTS Proline rich extensin signature 393 418 - -
Prci1g3906 567 PRINTS Proline rich extensin signature 259 275 - -
Prci1g3906 567 MobiDBLite consensus disorder prediction 352 377 - -
Prci1g3906 567 MobiDBLite consensus disorder prediction 229 271 - -
Prci1g3906 567 MobiDBLite consensus disorder prediction 272 296 - -
Prci1g3906 567 MobiDBLite consensus disorder prediction 396 412 - -
Prci1g3906 567 MobiDBLite consensus disorder prediction 314 330 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3906 1 312 Trihelix Transcription Factor Family AT5G14540 45.455 7.63e-71 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3906 - - qsa:O6P43_008925 623.239