Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3883 ATGCTGAACGGCGAAAGGTGGCTTCCGAACCCACACCGGAAAATGTCCGTGAAGCCTTGCTCCCATTTCCCGCGAAGCAAAAGCTTTTCTTTCATTTACGGATCGAATAGTGTCACTTGCAAAACCAAAACCCCATTTTTATTTTCCTTTAAAAGCTTGCAAAGTGCTAATTCGAAGTGCTATAAGAGGTTTGAATGCAGGAATTTGAAAACTTCTTGCCAATTCTTTGTTTCAGAGAATGATAAGTACGACTATGTTGATTCTGGGTTACGGAAGGCGTTTTCCTTTGCCCGGTCGATTTCACCTGGTGGTAGCTGGTGGAACTTATCTGAACATAAGCAAGACAATGTTGAAGCGGCAAAGCCATTAACGGCGCTGCTTGCTCTTCGCCGGATGTGGGTTTTAATTTCCGGCGAGAGATGGATTTTATTTGTGGCTTTTGGTTCACTTGTTATTGCTGCCGTTTCAGAGATCTCCATGCCAAGTATACTGGCTGCGTCAATATTTTCAGCACAGAGCGGTGAGACCGTGGGTTTCTACCGGAAGGCACAGTCTTTACTTGTTCTGTGTTTCGCTTCAGGCATATGCAGTGGTCTGCGAAGTGGCTGCTTTGGAATTTTGAATGTAATCCTGGTAAAGCGTCTGCGAGAAAATCTGTATGCAGCTCTTCTTTTTCAGGACATATCCTATTTTGATAGAGAGCAGGTTGGTGACTTAACAAGTAGGCTTTCAACAGATTGTCAACGACTATCTTATGTCATAGGAAATGATCTTCATTTGATTTTTCGCAACACTTTACAGGGAACAGGAGCAGTAATTAATTTGCTGACTTTATCATGGCCTTTGGCATTGTCCGCCCTGGTGATTTGCTCTGTTTTATCTGCAATTTTCCTCGTTTATGGCCGGTATCAAAGAAAAGCAGCAAAGTTGACCCAAGATTTCACAGCTAGTGCCAATGAAGTAGCCCAGGAAACCCTTTCACTGGTTAGAACGGTCCGAACCTATGGTGCTGAAGTAGAAGAAGTTGGAAGGTACAAGCAATGGCTTCGGAGATTAGCATTTGTAAACACTAGAGAGAGTTTGGCTTATGGTTTTTGGAATCTGAGTTTTAACACCCTCTACCGTTCAAGTCAGATATTTGCTGTGCTGTTAGGAGGGATGTCTGTTCTCTGTTGTTGTGTGACTGTGGAACAGCTTACTAAGTATGTGTTATACTGTGAGTGGCTGATATTTGCCACTTGGAGGGTGACAAATAGCTTGTCATCATTCCTGCAGTCCATTGGAGCATGTGAAAAAGTTTTTAAAATGATGGATCTTTTGCCCAGTGACCAATTTCTATCTAAAGGAGTGAAGTTGCAGAGGTTAAGGGGACGTTTTGAGTTTGTAAATGTATCATTTTGCTATCCTACGAGGATCATGGTTCCTGTTCTAGAACGCTTAAACTTTTCTGTAGAAGCAAATGAAGTGATTGCTATAGTTGGTGTTAGTGGCAGCGGAAAGAGCACATTACTCAACCTCTTACTTCGTTTATATGAGCCAAGTAATGGTCAGATTTACATTGATGGGTTTCCTCTCGGAGAATTGGATATCAGATGGCTGAGACAAAACATTGGATATATAGCACAGGAACCACATCTCTTTCACATGGACATTAAGTCAAACATAAAATATGGTTGCCCCAGAGACATTAAACAGGAAGATGTTGAACGAGCAGCAAAGCAGGCCTATGCTCATGACTTTATTTCATCATTTCCCAACGGCTACGAAACCATTGTTGATGATGACTCACTCAGTGGGGGGCAAAAGCAACGAATTGCCATTGCTAGGGCCATTCTTCGGGACCCAATTATTATGATACTTGATGAAGCAACCAGTGCTCTAGATCCTGAGAGTGAGCATTACATCAAGGAGGTTGTATATTCATTAAGAAGTGGATCTAAAGCAAGAACCATCATTATCATAGCACATAGGCTTTCTACCATAAAAGCTGCTGACAGGATCTTCGTAATGGATGGTGGTCGCATCATTGAGATGGGTAACCACGAAGAACTTCTGCTTGAAGATGGGTTCTATGCAAAACTGTATAAGGGTCAAACAGATGCTTTGACTTGA 2112 0.4228 MLNGERWLPNPHRKMSVKPCSHFPRSKSFSFIYGSNSVTCKTKTPFLFSFKSLQSANSKCYKRFECRNLKTSCQFFVSENDKYDYVDSGLRKAFSFARSISPGGSWWNLSEHKQDNVEAAKPLTALLALRRMWVLISGERWILFVAFGSLVIAAVSEISMPSILAASIFSAQSGETVGFYRKAQSLLVLCFASGICSGLRSGCFGILNVILVKRLRENLYAALLFQDISYFDREQVGDLTSRLSTDCQRLSYVIGNDLHLIFRNTLQGTGAVINLLTLSWPLALSALVICSVLSAIFLVYGRYQRKAAKLTQDFTASANEVAQETLSLVRTVRTYGAEVEEVGRYKQWLRRLAFVNTRESLAYGFWNLSFNTLYRSSQIFAVLLGGMSVLCCCVTVEQLTKYVLYCEWLIFATWRVTNSLSSFLQSIGACEKVFKMMDLLPSDQFLSKGVKLQRLRGRFEFVNVSFCYPTRIMVPVLERLNFSVEANEVIAIVGVSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLGELDIRWLRQNIGYIAQEPHLFHMDIKSNIKYGCPRDIKQEDVERAAKQAYAHDFISSFPNGYETIVDDDSLSGGQKQRIAIARAILRDPIIMILDEATSALDPESEHYIKEVVYSLRSGSKARTIIIIAHRLSTIKAADRIFVMDGGRIIEMGNHEELLLEDGFYAKLYKGQTDALT 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3883 703 Gene3D ABC transporter type 1, transmembrane domain 272 456 IPR036640 GO:0005524|GO:0016020
Prci1g3883 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 450 698 IPR027417 -
Prci1g3883 703 FunFam Multidrug ABC transporter ATP-binding protein 451 702 - -
Prci1g3883 703 SMART AAA_5 486 674 IPR003593 GO:0016887
Prci1g3883 703 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 144 425 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g3883 703 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 459 697 IPR003439 GO:0005524
Prci1g3883 703 Pfam ABC transporter transmembrane region 144 405 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g3883 703 Pfam ABC transporter 477 625 IPR003439 GO:0005524
Prci1g3883 703 Gene3D - 457 699 IPR027417 -
Prci1g3883 703 ProSitePatterns ABC transporters family signature. 597 611 IPR017871 GO:0005524|GO:0016887
Prci1g3883 703 CDD ABC_6TM_TAP 146 433 - -
Prci1g3883 703 SUPERFAMILY ABC transporter transmembrane region 130 443 IPR036640 GO:0005524|GO:0016020
Prci1g3883 703 PANTHER ABC TRANSPORTER B FAMILY 114 695 IPR039421 -
Prci1g3883 703 Gene3D ABC transporter type 1, transmembrane domain 107 271 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3883 Prci-Chr1 54507494 54516558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3883 214 701 Calmodulin-binding Proteins AT2G36910 35.478 1.35e-74 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3883 - - pcin:129294067 1382.85