Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g3882 | ATGCTGAACGGCGAAAGGTGGCTTCCGAACCCACACCGGAAAATGTCCGTGAAGCCTTGCTCCCATTTCCCGCGAAGCAAAAGCTTTTCTTTCATTTACGGATCGAATAGTGTCACTTGCAAAACCAAAACCCCATTTTTATTTTCCTTTAAAAGCTTGCAAAGTGCTAATTCGAAGTGCTATAAGAGGTTTGAATGCAGGAATTTGAAAACTTCTTGCCAATTCTTTGTTTCAGAGAATGATAAGTACGACTATGTTGATTCTGGGTTACGGAAGGCGTTTTCCTTTGCCCGGTCGATTTCACCTGGTGGTAGCTGGTGGAACTTATCTGAACATAAGCAAGACAATGTTGAAGCGGCAAAGCCATTAACGGCGCTGCTTGCTCTTCGCCGGATGTGGGTTTTAATTTCCGGCGAGAGATGGATTTTATTTGTGGCTTTTGGTTCACTTGTTATTGCTGCCGTTTCAGAGATCTCCATGCCAAGTATACTGGCTGCGTCAATATTTTCAGCACAGAGCGGTGAGACCGTGGGTTTCTACCGGAAGGCACAGTCTTTACTTGTTCTGTGTTTCGCTTCAGGCATATGCAGTGGTCTGCGAAGTGGCTGCTTTGGAATTTTGAATGTAATCCTGGTAAAGCGTCTGCGAGAAAATCTGTATGCAGCTCTTCTTTTTCAGGACATATCCTATTTTGATAGAGAGCAGGTTGGTGACTTAACAAGTAGGCTTTCAACAGATTGTCAACGACTATCTTATGTCATAGGAAATGATCTTCATTTGATTTTTCGCAACACTTTACAGGGAACAGGAGCAGTAATTAATTTGCTGACTTTATCATGGCCTTTGGCATTGTCCGCCCTGGTGATTTGCTCTGTTTTATCTGCAATTTTCCTCGTTTATGGCCGGTATCAAAGAAAAGCAGCAAAGTTGACCCAAGATTTCACAGCTAGTGCCAATGAAGTAGCCCAGGAAACCCTTTCACTGGTTAGAACGGTCCGAACCTATGGTGCTGAAGTAGAAGAAGTTGGAAGGTACAAGCAATGGCTTCGGAGATTAGCATTTGTAAACACTAGAGAGAGTTTGGCTTATGGTTTTTGGAATCTGAGTTTTAACACCCTCTACCGTTCAAGTCAGACTAGAAGTGATGTGAAACGCAACATGCAGATATTTGCTGTGCTGTTAGGAGGGATGTCTGTTCTCTGTTGTTGTGTGACTGTGGAACAGCTTACTAAGTATGTGTTATACTGTGAGTGGCTGATATTTGCCACTTGGAGGGTGACAAATAGCTTGTCATCATTCCTGCAGTCCATTGGAGCATGTGAAAAAGTTTTTAAAATGATGGATCTTTTGCCCAGTGACCAATTTCTATCTAAAGGAGTGAAGTTGCAGAGGTTAAGGGGACGTTTTGAGTTTGTAAATGTATCATTTTGCTATCCTACGAGGATCATGGTTCCTGTTCTAGAACGCTTAAACTTTTCTGTAGAAGCAAATGAAGTGATTGCTATAGTTGGTGTTAGTGGCAGCGGAAAGAGCACATTACTCAACCTCTTACTTCGTTTATATGAGCCAAGTAATGGTCAGATTTACATTGATGGGTTTCCTCTCGGAGAATTGGATATCAGATGGCTGAGACAAAACATTGGATATATAGCACAGGAACCACATCTCTTTCACATGGACATTAAGTCAAACATAAAATATGGTTGCCCCAGAGACATTAAACAGGAAGATGTTGAACGAGCAGCAAAGCAGGCCTATGCTCATGACTTTATTTCATCATTTCCCAACGGCTACGAAACCATTGTTGATGATGACTCACTCAGTGGGGGGCAAAAGCAACGAATTGCCATTGCTAGGGCCATTCTTCGGGACCCAATTATTATGATACTTGATGAAGCAACCAGTGCTCTAGATCCTGAGAGTGAGCATTACATCAAGGAGGTTGTATATTCATTAAGAAGTGGATCTAAAGCAAGAACCATCATTATCATAGCACATAGGCTTTCTACCATAAAAGCTGCTGACAGGATCTTCGTAATGGATGGTGGTCGCATCATTGAGATGGGTAACCACGAAGAACTTCTGCTTGAAGATGGGTTCTATGCAAAACTGTATAAGGGTCAAACAGATGCTTTGACTTGA | 2142 | 0.423 | MLNGERWLPNPHRKMSVKPCSHFPRSKSFSFIYGSNSVTCKTKTPFLFSFKSLQSANSKCYKRFECRNLKTSCQFFVSENDKYDYVDSGLRKAFSFARSISPGGSWWNLSEHKQDNVEAAKPLTALLALRRMWVLISGERWILFVAFGSLVIAAVSEISMPSILAASIFSAQSGETVGFYRKAQSLLVLCFASGICSGLRSGCFGILNVILVKRLRENLYAALLFQDISYFDREQVGDLTSRLSTDCQRLSYVIGNDLHLIFRNTLQGTGAVINLLTLSWPLALSALVICSVLSAIFLVYGRYQRKAAKLTQDFTASANEVAQETLSLVRTVRTYGAEVEEVGRYKQWLRRLAFVNTRESLAYGFWNLSFNTLYRSSQTRSDVKRNMQIFAVLLGGMSVLCCCVTVEQLTKYVLYCEWLIFATWRVTNSLSSFLQSIGACEKVFKMMDLLPSDQFLSKGVKLQRLRGRFEFVNVSFCYPTRIMVPVLERLNFSVEANEVIAIVGVSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLGELDIRWLRQNIGYIAQEPHLFHMDIKSNIKYGCPRDIKQEDVERAAKQAYAHDFISSFPNGYETIVDDDSLSGGQKQRIAIARAILRDPIIMILDEATSALDPESEHYIKEVVYSLRSGSKARTIIIIAHRLSTIKAADRIFVMDGGRIIEMGNHEELLLEDGFYAKLYKGQTDALT | 713 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g3882 | 713 | SMART | AAA_5 | 496 | 684 | IPR003593 | GO:0016887 | |
Prci1g3882 | 713 | Gene3D | - | 459 | 712 | IPR027417 | - | |
Prci1g3882 | 713 | Pfam | ABC transporter transmembrane region | 144 | 365 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Prci1g3882 | 713 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 144 | 373 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Prci1g3882 | 713 | FunFam | Multidrug ABC transporter ATP-binding protein | 461 | 712 | - | - | |
Prci1g3882 | 713 | Gene3D | ABC transporter type 1, transmembrane domain | 124 | 453 | IPR036640 | GO:0005524|GO:0016020 | |
Prci1g3882 | 713 | PANTHER | ABC TRANSPORTER B FAMILY | 114 | 705 | IPR039421 | - | |
Prci1g3882 | 713 | ProSitePatterns | ABC transporters family signature. | 607 | 621 | IPR017871 | GO:0005524|GO:0016887 | |
Prci1g3882 | 713 | Pfam | ABC transporter | 487 | 635 | IPR003439 | GO:0005524 | |
Prci1g3882 | 713 | CDD | ABC_6TM_TAP | 146 | 443 | - | - | |
Prci1g3882 | 713 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 469 | 707 | IPR003439 | GO:0005524 | |
Prci1g3882 | 713 | SUPERFAMILY | ABC transporter transmembrane region | 130 | 453 | IPR036640 | GO:0005524|GO:0016020 | |
Prci1g3882 | 713 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 460 | 708 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g3882 | Prci-Chr1 | 54507494 | 54516562 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g3882 | 214 | 711 | Calmodulin-binding Proteins | AT2G36910 | 34.866 | 7.39e-74 | 258 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g3882 | - | - | pcin:129294067 | 1410.2 |