Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3869 ATGTCGATGGAGTCGCCTCTCAATGGAGCTGAGTCCATATCAGAGGTTCAGAATTCGGTTTCTGCAATAGATCACGATTCTCCTTCAACATCTGAAACTCCAAGGCCTTCTTCACGGCCTCCCTTGAGAGCGTCATCAAGAAATCACGTGGCTTCTTCCACATCCCACCTCACTGGACATCCTAATTTCGGAATGAAGATTCACCAAAAGCATCCTTTCCAGGAAACCAACCATGTGCAGCATCAAGAACTACCAAATACGGCCAAGCAACATCACAATTCTACTTCAGAGAAGAGCATATCTATGATGGAAACAGAGAATTATGACGCAAAAGGGATATTAGCCCCCTCTAAAGGAGTTGTTGATCAAACGAAGAGTTGCTCTCAGTCAGATGTCACGTTCTGTGCAAGTCCTAAGAATAGCTTCTATTCTGCGGCTACCTATTCAGAAGCCAAACAAAGTTTCGCCAATACTGAAGCCAGTGAGCGTGTTAGTGCGGACAAGTCTGGTGAAAGTGGTGAGGTCACTAACTCCTGTGACTTTAACGAGAGCAGGAAGACCAGCATCTGTAGAGGAAGTACTGGGAGTGATGTGAGTGATGAGAGTAGCACCAGTAGTTTAAGCAGTGCTTTGTATAAACCCCACAAGGCAAATGATATAAGATGGGAAGCGATTCAGGCCGTGCGAGCTCGCGATGGGATGCTGGAAATGAGGCATTTCAGGTTGTTGAAGCAATTGGGATGTGGAGACATTGGGAGTGTGCATCTTGCAGAGTTGACTGGCACAAGGACATGTTTTGCAATGAAGATAATGAACAAAACAGAGCTGGCTAGTAGGAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATCTTGCAGTCTCTGGATCACCCTTTTTTGCCCACATTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTGAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCTGCCAGGTTTTATGTAGCTGAAGTTCTTCTTGCGTTGGAATACTTGCACATGCTTGGGATCATCTACAGAGATCTCAAACCAGAGAACGTGTTGGTGCGAGAAGACGGTCACATAATGCTCTCAGACTTCGACCTTTCTCTGCGATGCGCGGTGAGTCCAACTCTCGTAAAATCCTCAAACTCTACCCTGAACGGAAGAACTTCTGGATACTGCATTCAACCAGCCTGCATCGAACCGACCTGCGTGATGCAGCCAGATTGCATCCAACCCTCCTGTTTCACGCCTCGCTTTCTATCAGGCAAATCCAAGAAAGACAAAAGGCCCAAACCAAAGACTGAAACGCCTCACCAGGTGACTCCTCTCCCGGAGCTCATCGCCGAGCCCACAAACGCCCGGTCCATGTCCTTCGTGGGCACACACGAATACTTAGCACCCGAAATCATTAAGGGCGAAGGCCACGGGAGTGCAGTGGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCGTTCAAGGGGTCGGCAAACAGAGCGACTCTGTTCAACGTGGTGGGGCAGCCGTTGAGGTTTCCAGAATCACCAACCGTTAGCTTCGCTGCCCGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCCCAGCATCGTCTGGCTTATAGACGTGGAGCCACGGAGATCAAACAGCATCCATTCTTTCAGAACGTGAACTGGGCACTGATACGGTGTACGAACCCTCCGGAGGTCCCGAGGACGGTGGCCATGAAAGAGATGGCAGCTCAAAATGTGCCCGGCGTTAAGCCTGCCGGTAACTATTTAGATATTGATTTCTTTTAA 1869 0.488 MSMESPLNGAESISEVQNSVSAIDHDSPSTSETPRPSSRPPLRASSRNHVASSTSHLTGHPNFGMKIHQKHPFQETNHVQHQELPNTAKQHHNSTSEKSISMMETENYDAKGILAPSKGVVDQTKSCSQSDVTFCASPKNSFYSAATYSEAKQSFANTEASERVSADKSGESGEVTNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRARDGMLEMRHFRLLKQLGCGDIGSVHLAELTGTRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLNGRTSGYCIQPACIEPTCVMQPDCIQPSCFTPRFLSGKSKKDKRPKPKTETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCTNPPEVPRTVAMKEMAAQNVPGVKPAGNYLDIDFF 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3869 622 MobiDBLite consensus disorder prediction 156 179 - -
Prci1g3869 622 ProSiteProfiles Protein kinase domain profile. 240 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3869 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Prci1g3869 622 Gene3D Phosphorylase Kinase; domain 1 239 323 - -
Prci1g3869 622 Gene3D Transferase(Phosphotransferase) domain 1 472 595 - -
Prci1g3869 622 MobiDBLite consensus disorder prediction 1 71 - -
Prci1g3869 622 FunFam serine/threonine-protein kinase D6PK-like 324 391 - -
Prci1g3869 622 FunFam serine/threonine-protein kinase D6PK-like 472 595 - -
Prci1g3869 622 PANTHER FLIPPASE KINASE 1-RELATED 79 600 - -
Prci1g3869 622 Pfam Protein kinase domain 474 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3869 622 Pfam Protein kinase domain 241 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3869 622 CDD STKc_phototropin_like 238 595 - -
Prci1g3869 622 FunFam Serine/threonine-protein kinase D6PK-like 238 323 - -
Prci1g3869 622 SUPERFAMILY Protein kinase-like (PK-like) 218 601 IPR011009 -
Prci1g3869 622 Gene3D Transferase(Phosphotransferase) domain 1 324 421 - -
Prci1g3869 622 SMART serkin_6 240 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3869 622 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3869 Prci-Chr1 54468084 54472536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3869 148 622 AGC Kinase Gene Family AT5G47750 70.935 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci1g3869 Pkinase 6.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3869 K08286 - gmx:100802402 927.546