Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3867 ATGGAGAAACAGGTCGTGGAAAACCTATGGCAGGGTGAGAGAGAGGCTCAGATTCAAGCAGCAATGGAGCTCACTAGATTAAGCAACAAGCAGAGACACAAGTTAGCAGAAAATGGAATAATGGTGCCTCTGATTTCCATGCTTCATTCTCAAGACCACGAAGCCATTGAAGCTTCTCTCTGTGCTCTGCTCTGTCTCGCCTTTGGCAGTGAACGGAACAAGATTCGGATTGTCAAGTGTGGAGCTTTACCAGTGTTGCTGAATCTCCTGCAATGCCAGAGCCAACCACTCGTAGAATTAACAATAGCCGCGATGCTAACTCTCTCTTCTTGCAAATCAAATAAGCTAGCTATAGCTTCATCCGGGGCTATCCAATTACTAGTACAGATTCTGAATGGCCATTATGAAAATTGCACAAACACTCAATCCCAGCTTGACGCCATAGCCACACTCCATAACCTCTCAACCTGTCAAGAGATAACACCACTGCTAGTCTCTTCAGGTATAACAATGTCCTTACTTGAACTGATTCACAACTCAGGAAAATCAAGTGAGAAGGTTGAGAAAGCAATCGGGTTGCTGGAAAACATTGTGTACTCATCAGAGAGAGCACTGAACGAGACTTCTAGCATAGGAGGGGCGATCAGGATAGTGGTTGAGACTATTGAGGAAGGGTCCATGATAGGGAAAGAGCATGCAGTGGGAATACTGCTTCTGATATGTAAAAGTTGCAGGGAGAAATACAGAGGAATGATACTGAGAGAGGGAGTGATGCCTGGGCTGCTTCAGTTAAGCGTGGATGGGACTCAGAGAGCTAAAGGGATGGCTCGAGAATTGTTGTTGCTTCTGAGGGATTGCTCCAATTATGGTTCAACGAGTGGGAAGAAGATGAATCATGTGATCATAGAACGGATAATGCAGGAGATTGATGAGGAAGGTGAGGAATTGGTTGGGAGTACTCTGAGATTGGTAGAGGAGATGATTGCCAAGCTTCATACATGA 1002 0.4521 MEKQVVENLWQGEREAQIQAAMELTRLSNKQRHKLAENGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERNKIRIVKCGALPVLLNLLQCQSQPLVELTIAAMLTLSSCKSNKLAIASSGAIQLLVQILNGHYENCTNTQSQLDAIATLHNLSTCQEITPLLVSSGITMSLLELIHNSGKSSEKVEKAIGLLENIVYSSERALNETSSIGGAIRIVVETIEEGSMIGKEHAVGILLLICKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNYGSTSGKKMNHVIIERIMQEIDEEGEELVGSTLRLVEEMIAKLHT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3867 333 SMART arm_5 28 68 IPR000225 GO:0005515
Prci1g3867 333 SMART arm_5 70 110 IPR000225 GO:0005515
Prci1g3867 333 SMART arm_5 111 156 IPR000225 GO:0005515
Prci1g3867 333 SMART arm_5 157 199 IPR000225 GO:0005515
Prci1g3867 333 FunFam U-box domain-containing protein 4 205 322 - -
Prci1g3867 333 SUPERFAMILY ARM repeat 4 324 IPR016024 -
Prci1g3867 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Prci1g3867 333 FunFam U-box domain-containing protein 4 3 201 - -
Prci1g3867 333 Gene3D - 3 331 IPR011989 -
Prci1g3867 333 Pfam Armadillo/beta-catenin-like repeat 71 99 IPR000225 GO:0005515
Prci1g3867 333 PANTHER U BOX DOMAIN-CONTAINING 5 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3867 Prci-Chr1 54447554 54449609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3867 4 285 U-box Gene Family AT3G54790 32.432 6.17e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3867 - - qsa:O6P43_004678 475.707