Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3839 ATGGCTCCGATATTATCTCTGAAGCCTCTGCTTTTGGTCACAGCCATAGTTGCTGCAATGTGCCAAGGTGGCGAGACAGGTCTTCTTCCTCCAAAAACAACAGTCCAAATCATCAATACCTTGCCTAAGCACGAGGACTTGACACTTCATTGCAAAGACAAGCATCATGATCTTGGGGAGCACACTCTGAAATTCGAAGAGTCGTTTGAATTCAGATTCAGGCCAAATCTTATGATGAATTCGACTCTTTATTTCTGTAGTTTTTGGTGGCAATCAGGAGAACCTCGTTACTTTGACATATACAAACAGGAACGAGACAAGTGCAAGGTGTGTACTTGGAAAGTAACTGAGTATGGTCCTTGCTTGTTCGGCGTTTGCTATCCCTGGAATAAGTCTCAACCGCGGTCAACGCTTGTTCCTGATAACCTTGACCGTGTTATTACATCAAATGCCAAAATTACCCGATCTCGTCCCTGA 477 0.4403 MAPILSLKPLLLVTAIVAAMCQGGETGLLPPKTTVQIINTLPKHEDLTLHCKDKHHDLGEHTLKFEESFEFRFRPNLMMNSTLYFCSFWWQSGEPRYFDIYKQERDKCKVCTWKVTEYGPCLFGVCYPWNKSQPRSTLVPDNLDRVITSNAKITRSRP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3839 158 PANTHER - 30 122 IPR010264 -
Prci1g3839 158 Pfam Plant self-incompatibility protein S1 34 123 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3839 Prci-Chr1 54342988 54343464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3839 26 130 Carbohydrate Esterase AT3G16970 41.525 3.22e-25 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3839 - - pcin:129297218 337.806